RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 TSNARE1Q96NA8 513 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 PPIP5K2O43314 1243 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
PTPRO-202ENST00000348962 DBNDD2Q9BQY9 259 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 F13A1P00488 732 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 TRPC5Q9UL62 973 aaPredicted RBP17.49■□□□□ 0.39
PTPRO-202ENST00000348962 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 RPL13P26373 211 aaKnown RBP17.49■□□□□ 0.39
PTPRO-202ENST00000348962 CHMLP26374 656 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 FCHSD1Q86WN1 690 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 TTC16Q8NEE8 873 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 ZKSCAN3Q9BRR0 538 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 ATP7AQ04656 1500 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 USP48Q86UV5 1035 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 IKBKGQ9Y6K9 419 aa17.49■□□□□ 0.39
PTPRO-202ENST00000348962 ARMT1Q9H993 441 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 BCS1LQ9Y276 419 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 ADCY5O95622 1261 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 GCKRQ14397 625 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 NEO1Q92859 1461 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 ZBED4O75132 1171 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 SLC1A4P43007 532 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 GIMAP6Q6P9H5 292 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 TAF5LO75529 589 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 AK2P54819 239 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 LETM2Q2VYF4 491 aa17.48■□□□□ 0.39
PTPRO-202ENST00000348962 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 DACT1Q9NYF0 836 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 RXRAP19793 462 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 CCDC24Q8N4L8 307 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 CCDC65Q8IXS2 484 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 ZNF594Q96JF6 807 aaPredicted RBP17.47■□□□□ 0.39
PTPRO-202ENST00000348962 CNPY2Q9Y2B0 182 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 B4E1Z4 1266 aa17.47■□□□□ 0.39
PTPRO-202ENST00000348962 NOP56O00567 594 aaKnown RBP17.46■□□□□ 0.39
PTPRO-202ENST00000348962 CCDC117Q8IWD4 279 aaPredicted RBP17.46■□□□□ 0.39
PTPRO-202ENST00000348962 BBXQ8WY36 941 aaPredicted RBP17.46■□□□□ 0.39
PTPRO-202ENST00000348962 LTKP29376 864 aa17.46■□□□□ 0.39
PTPRO-202ENST00000348962 GIGYF2Q6Y7W6 1299 aaKnown RBP17.46■□□□□ 0.39
PTPRO-202ENST00000348962 AATFQ9NY61 560 aaKnown RBP eCLIP17.46■□□□□ 0.39
PTPRO-202ENST00000348962 DEXIO95424 95 aa17.46■□□□□ 0.39
PTPRO-202ENST00000348962 SMTNP53814 917 aa17.46■□□□□ 0.39
PTPRO-202ENST00000348962 ZYXQ15942 572 aaKnown RBP17.46■□□□□ 0.39
PTPRO-202ENST00000348962 GPAA1O43292 621 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 RLBP1P12271 317 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 GNG11P61952 73 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 DPH6Q7L8W6 267 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 FMNL3Q8IVF7 1028 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.38
PTPRO-202ENST00000348962 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 IRX3P78415 501 aaPredicted RBP17.45■□□□□ 0.38
PTPRO-202ENST00000348962 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
PTPRO-202ENST00000348962 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 LMBR1Q8WVP7 490 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 PKD2L1Q9P0L9 805 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 PLCD1P51178 756 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 SNW1Q13573 536 aaKnown RBP17.45■□□□□ 0.38
PTPRO-202ENST00000348962 PRKG1Q13976 671 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 GRIPAP1Q4V328 841 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 PSMD1Q99460 953 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPRO-202ENST00000348962 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 SV2BQ7L1I2 683 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 C16orf45Q96MC5 204 aaPredicted RBP17.45■□□□□ 0.38
PTPRO-202ENST00000348962 SELENOOQ9BVL4 669 aa17.45■□□□□ 0.38
PTPRO-202ENST00000348962 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
PTPRO-202ENST00000348962 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
PTPRO-202ENST00000348962 PPP1R2P41236 205 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 CSADQ9Y600 493 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 SPATA5Q8NB90 893 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
PTPRO-202ENST00000348962 SNX21Q969T3 373 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 ANGEL1Q9UNK9 670 aaKnown RBP17.44■□□□□ 0.38
PTPRO-202ENST00000348962 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
PTPRO-202ENST00000348962 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 EAPPQ56P03 285 aaPredicted RBP17.44■□□□□ 0.38
PTPRO-202ENST00000348962 FNBP1Q96RU3 617 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
PTPRO-202ENST00000348962 PRDM1O75626 825 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 TEKT1Q969V4 418 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 IFT74Q96LB3 600 aa17.43■□□□□ 0.38
PTPRO-202ENST00000348962 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms