RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GRIN1Q05586 938 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 CTDSPL2Q05D32 466 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 TMED8Q6PL24 325 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 LDHAL6AQ6ZMR3 332 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 FMR1NBQ8N0W7 255 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 MAP3K15Q6ZN16 1313 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ANKRD36CQ5JPF3 1778 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 DPCR1Q3MIW9 517 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 SLC9C2Q5TAH2 1124 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 SUSD4Q5VX71 490 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ZSCAN25Q6NSZ9 544 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 SASS6Q6UVJ0 657 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 TDRD7Q8NHU6 1098 aaKnown RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 B4E1Z4 1266 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ADAMTS3O15072 1205 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 FOXN1O15353 648 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 CDK11BP21127 795 aaKnown RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ADD2P35612 726 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 AXDND1Q5T1B0 1012 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 CCDC102BQ68D86 513 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 LINC00301Q8NCQ3 95 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ZNF274Q96GC6 653 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ZKSCAN3Q9BRR0 538 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 IQSEC3Q9UPP2 1182 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-201ENST00000347613 ZNF532Q9HCE3 1301 aa7.09□□□□□ -1.27
CLCN3-201ENST00000347613 PCNTO95613 3336 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 BCL9O00512 1426 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 BIN1O00499 593 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 IRS4O14654 1257 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 MARCKSP29966 332 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 CTSWP56202 376 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 TRIM28Q13263 835 aaKnown RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 IFIT5Q13325 482 aaKnown RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 ATP2B3Q16720 1220 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 METTL24Q5JXM2 366 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 SPECC1Q5M775 1068 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 NAA16Q6N069 864 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 FOXP4Q8IVH2 680 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 MYRIPQ8NFW9 859 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 ACSBG1Q96GR2 724 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 PLA2G12BQ9BX93 195 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 NTRK3Q16288 839 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 INTS5Q6P9B9 1019 aaKnown RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 FSIP1Q8NA03 581 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 IGDCC4Q8TDY8 1250 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 LLPHQ9BRT6 129 aaKnown RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 DISP2A7MBM2 1401 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 GOLGA8BA8MQT2 603 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 IDH1O75874 414 aaKnown RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 FGFR2P21802 821 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 ME1P48163 572 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 GOLGA8FQ08AF8 430 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 GOLGA8DPQ0D2H9 430 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 TRIM5Q9C035 493 aa7.08□□□□□ -1.28
CLCN3-201ENST00000347613 COL16A1Q07092 1604 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-201ENST00000347613 WNT7AO00755 349 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 PDE8BO95263 885 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 BCAMP50895 628 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 TERF1P54274 439 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 ITPK1Q13572 414 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 RASGRF1Q13972 1273 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 CCDC158Q5M9N0 1113 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 DNTTIP2Q5QJE6 756 aaKnown RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 GORABQ5T7V8 394 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 FBXO18Q8NFZ0 1043 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 ZNF384Q8TF68 577 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 APPBP2Q92624 585 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 C16orf45Q96MC5 204 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 ZSCAN16Q9H4T2 348 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 BCL2L12Q9HB09 334 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 DDX19AQ9NUU7 478 aaKnown RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 TRMT112Q9UI30 125 aaKnown RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 CHD4Q14839 1912 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 DOT1LQ8TEK3 1739 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 GOLGA6L4A6NEF3 574 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 FANCGO15287 622 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 KCNQ2O43526 872 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 BMP6P22004 513 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 KIF23Q02241 960 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 NOM1Q5C9Z4 860 aaKnown RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 CCDC82Q8N4S0 544 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 LRRN4CLQ8ND94 238 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 ARMT1Q9H993 441 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 ZSWIM5Q9P217 1185 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 DOCK2Q92608 1830 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 PDE6AP16499 860 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 NCAPHQ15003 741 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 SHC4Q6S5L8 630 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 FBXL16Q8N461 479 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 AOPEPQ8N6M6 819 aa7.07□□□□□ -1.28
CLCN3-201ENST00000347613 STRBPQ96SI9 672 aaKnown RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 ORC3Q9UBD5 711 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 BAZ2BQ9UIF8 2168 aaKnown RBP7.07□□□□□ -1.28
CLCN3-201ENST00000347613 COL1A1P02452 1464 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms