RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 ATL3Q6DD88 541 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 MYL5Q02045 173 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
STAU1-202ENST00000347458 LINC00301Q8NCQ3 95 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 RTEL1Q9NZ71 1219 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
STAU1-202ENST00000347458 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
STAU1-202ENST00000347458 FAM208AQ9UK61 1670 aaKnown RBP12.59□□□□□ -0.39
STAU1-202ENST00000347458 CCT2P78371 535 aaKnown RBP12.59□□□□□ -0.39
STAU1-202ENST00000347458 HSP90AB4PQ58FF6 505 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 AACSQ86V21 672 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 EHD4Q9H223 541 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 HMG20BQ9P0W2 317 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 SIGLEC1Q9BZZ2 1709 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 CPS1P31327 1500 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 MED23Q9ULK4 1368 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
STAU1-202ENST00000347458 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
STAU1-202ENST00000347458 SOWAHDA6NJG2 315 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
STAU1-202ENST00000347458 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.58□□□□□ -0.4
STAU1-202ENST00000347458 EGFL6Q8IUX8 553 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 NOA1Q8NC60 698 aaKnown RBP12.58□□□□□ -0.4
STAU1-202ENST00000347458 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
STAU1-202ENST00000347458 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 NCOA5Q9HCD5 579 aaKnown RBP12.58□□□□□ -0.4
STAU1-202ENST00000347458 BCCIPQ9P287 314 aaKnown RBP eCLIP12.58□□□□□ -0.4
STAU1-202ENST00000347458 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 PFKFB2O60825 505 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 TAF5LO75529 589 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 STK38Q15208 465 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 RPAINQ86UA6 219 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 KAT14Q9H8E8 782 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 COL15A1P39059 1388 aa12.58□□□□□ -0.4
STAU1-202ENST00000347458 HIP1O00291 1037 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 USP8P40818 1118 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
STAU1-202ENST00000347458 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 EBAG9O00559 213 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.42e-8■■■■■ 46.4
STAU1-202ENST00000347458 KIF4BQ2VIQ3 1234 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 ZNF569Q5MCW4 686 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 GBP3Q9H0R5 595 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 ACBD3Q9H3P7 528 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 N4BP2Q86UW6 1770 aaPredicted RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 AGLP35573 1532 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 SHOX2O60902 331 aaPredicted RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 ALDH1L1O75891 902 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 PFKFB1P16118 471 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 PPP2R5AQ15172 486 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 GBP6Q6ZN66 633 aa12.57□□□□□ -0.4
STAU1-202ENST00000347458 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
STAU1-202ENST00000347458 CCDC175P0C221 793 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 INPP5BP32019 993 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 IRAK1P51617 712 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
STAU1-202ENST00000347458 MYO1FO00160 1098 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 CHGBP05060 677 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 GPTP24298 496 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 KRT32Q14532 448 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 SPECC1LQ69YQ0 1117 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 EDC3Q96F86 508 aaKnown RBP12.56□□□□□ -0.4
STAU1-202ENST00000347458 GNL3LQ9NVN8 582 aaKnown RBP12.56□□□□□ -0.4
STAU1-202ENST00000347458 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 JCADQ9P266 1359 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 RIMS1Q86UR5 1692 aaKnown RBP12.56□□□□□ -0.4
STAU1-202ENST00000347458 MROH7-TTC4A0A0A0MT08 1334 aa12.56□□□□□ -0.4
STAU1-202ENST00000347458 SPTLC2O15270 562 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 KIF5CO60282 957 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 PNOCQ13519 176 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
STAU1-202ENST00000347458 RAD9BQ6WBX8 426 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 GDAP1L1Q96MZ0 367 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CD248Q9HCU0 757 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CTAGE15A4D2H0 777 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 ABL1P00519 1130 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CYP21A2P08686 494 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CTAGE8P0CG41 777 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CDC27P30260 824 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 PDE4BQ07343 736 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 LRCH2Q5VUJ6 765 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CTAGE6Q86UF2 777 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 CTAGE4Q8IX94 777 aa12.55□□□□□ -0.4
STAU1-202ENST00000347458 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms