RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SMARCC2Q8TAQ2 1214 aa16.65■□□□□ 0.26
CDK5RAP1-202ENST00000346416 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
CDK5RAP1-202ENST00000346416 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CTDNEP1O95476 244 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TM4SF1P30408 202 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ANTXR2P58335 489 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 NFIXQ14938 502 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ALX1Q15699 326 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ADRA2BP18089 450 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TRDNQ13061 729 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 IFNL3Q8IZI9 196 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ABCF2Q9UG63 623 aa16.64■□□□□ 0.25
CDK5RAP1-202ENST00000346416 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 EPB41L4AQ9HCS5 686 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 WDR19Q8NEZ3 1342 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 PTPDC1A2A3K4 754 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 NAPBQ9H115 298 aa16.63■□□□□ 0.25
CDK5RAP1-202ENST00000346416 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 GSG1L2A8MUP6 293 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 KLRK1P26718 216 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 UBE2HP62256 183 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 FAM173BQ6P4H8 233 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ANKRD2Q9GZV1 360 aa16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP1-202ENST00000346416 PRKAB2O43741 272 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TRIM37O94972 964 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 GNAT2P19087 354 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 UBR3Q6ZT12 1888 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 SYCE3A1L190 88 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 H3BQV1 296 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CYP7A1P22680 504 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 KRT85P78386 507 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 SLC27A3Q5K4L6 730 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 SYAP1Q96A49 352 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 SLC4A4Q9Y6R1 1079 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
CDK5RAP1-202ENST00000346416 SALL1Q9NSC2 1324 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ADGRA1Q86SQ6 560 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 B4E1Z4 1266 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 NACAP1Q9BZK3 213 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 KIF3AQ9Y496 699 aa16.6■□□□□ 0.25
CDK5RAP1-202ENST00000346416 NEDD4P46934 1319 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 SEMA3EO15041 775 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 GYS1P13807 737 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 ANGEL1Q9UNK9 670 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
CDK5RAP1-202ENST00000346416 HIBADHP31937 336 aaKnown RBP16.58■□□□□ 0.25
CDK5RAP1-202ENST00000346416 TDO2P48775 406 aa16.58■□□□□ 0.25
CDK5RAP1-202ENST00000346416 CTDSPL2Q05D32 466 aa16.58■□□□□ 0.25
CDK5RAP1-202ENST00000346416 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.25
CDK5RAP1-202ENST00000346416 LRSAM1Q6UWE0 723 aa16.58■□□□□ 0.25
CDK5RAP1-202ENST00000346416 INCENPQ9NQS7 918 aa16.58■□□□□ 0.25
CDK5RAP1-202ENST00000346416 RESTQ13127 1097 aa16.58■□□□□ 0.24
CDK5RAP1-202ENST00000346416 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CACNA1SQ13698 1873 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 MAGEB6P1A0A0J9YX57 407 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 DHX16O60231 1041 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 GRAPQ13588 217 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 AKNAD1Q5T1N1 836 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CHD4Q14839 1912 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SH2B2O14492 632 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 FDPSP14324 419 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 NASPP49321 788 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 FOSBP53539 338 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SCAND2PQ9GZW5 306 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP1-202ENST00000346416 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ZNF384Q8TF68 577 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms