RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 OPA1O60313 960 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 GCKP35557 465 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 CCDC129Q6ZRS4 1044 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 DDX41Q9UJV9 622 aaKnown RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 SPTLC2O15270 562 aa17.58■□□□□ 0.41
SRPK1-201ENST00000346162 SYCP1Q15431 976 aa17.58■□□□□ 0.41
SRPK1-201ENST00000346162 CRNKL1Q9BZJ0 848 aaKnown RBP17.58■□□□□ 0.41
SRPK1-201ENST00000346162 KAT14Q9H8E8 782 aa17.58■□□□□ 0.41
SRPK1-201ENST00000346162 MATR3P43243 847 aaKnown RBP eCLIP17.58■□□□□ 0.41e-6■■■□□ 15.3
SRPK1-201ENST00000346162 B4GALNT4Q76KP1 1039 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 CCDC113Q9H0I3 377 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 IFNKQ9P0W0 207 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.58■□□□□ 0.45e-9■■□□□ 11.4
SRPK1-201ENST00000346162 KARSQ15046 597 aaKnown RBP17.58■□□□□ 0.4
SRPK1-201ENST00000346162 DDB1Q16531 1140 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 HELLSQ9NRZ9 838 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 PKP1Q13835 747 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 SPTY2D1Q68D10 685 aaPredicted RBP17.58■□□□□ 0.4
SRPK1-201ENST00000346162 SLF2Q8IX21 1173 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
SRPK1-201ENST00000346162 UBA7P41226 1012 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 LIG3P49916 1009 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 IFFO1Q0D2I5 559 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 SPA17Q15506 151 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
SRPK1-201ENST00000346162 TEX2Q8IWB9 1127 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 TAF4BQ92750 862 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 CBX8Q9HC52 389 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 A1BGP04217 495 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 HLTFQ14527 1009 aaKnown RBP eCLIP17.57■□□□□ 0.44e-6■□□□□ 10.1
SRPK1-201ENST00000346162 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
SRPK1-201ENST00000346162 CTAGE9A4FU28 777 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 NEFHP12036 1026 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
SRPK1-201ENST00000346162 RAD51AP2Q09MP3 1159 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 NUP88Q99567 741 aaPredicted RBP17.56■□□□□ 0.4
SRPK1-201ENST00000346162 TMOD2Q9NZR1 351 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 SPECC1LQ69YQ0 1117 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
SRPK1-201ENST00000346162 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 JADE2Q9NQC1 790 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 WDHD1O75717 1129 aaPredicted RBP17.56■□□□□ 0.4
SRPK1-201ENST00000346162 CCDC96Q2M329 555 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 IFIT1BQ5T764 474 aaKnown RBP17.56■□□□□ 0.4
SRPK1-201ENST00000346162 TCP11L1Q9NUJ3 509 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 ATP7BP35670 1465 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 BCORL1Q5H9F3 1711 aa17.56■□□□□ 0.4
SRPK1-201ENST00000346162 YEATS4O95619 227 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 HSP90AA4PQ58FG1 418 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 LZTFL1Q9NQ48 299 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 TMEM266Q2M3C6 531 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 CHAMP1Q96JM3 812 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
SRPK1-201ENST00000346162 ZCCHC11Q5TAX3 1644 aaKnown RBP17.54■□□□□ 0.4
SRPK1-201ENST00000346162 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
SRPK1-201ENST00000346162 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 DNA2P51530 1060 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 CKAP4Q07065 602 aaKnown RBP17.54■□□□□ 0.4
SRPK1-201ENST00000346162 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 RFC4P35249 363 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
SRPK1-201ENST00000346162 SETDB2Q96T68 719 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 NDUFB9Q9Y6M9 179 aa17.54■□□□□ 0.4
SRPK1-201ENST00000346162 ACTN2P35609 894 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 PYM1Q9BRP8 204 aaKnown RBP17.53■□□□□ 0.4
SRPK1-201ENST00000346162 PPP1R1BQ9UD71 204 aaPredicted RBP17.53■□□□□ 0.4
SRPK1-201ENST00000346162 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
SRPK1-201ENST00000346162 DTNBO60941 627 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 BMP15O95972 392 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 MAGEB6Q8N7X4 407 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 SECISBP2LQ93073 1101 aaKnown RBP17.53■□□□□ 0.4
SRPK1-201ENST00000346162 GNAT2P19087 354 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 CHMP4BP1P59074 171 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 MIGA1Q8NAN2 632 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 NAA15Q9BXJ9 866 aaKnown RBP17.53■□□□□ 0.4
SRPK1-201ENST00000346162 IQGAP3Q86VI3 1631 aa17.53■□□□□ 0.4
SRPK1-201ENST00000346162 KIF4AO95239 1232 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 VEZTQ9HBM0 779 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 EFCAB6Q5THR3 1501 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 BRD1O95696 1058 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 PEX19P40855 299 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 BRAPQ7Z569 592 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 CAPN7Q9Y6W3 813 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 PRR36Q9H6K5 1346 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 KIF1BO60333 1816 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 NEURL1BA8MQ27 555 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 RXRAP19793 462 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
SRPK1-201ENST00000346162 IDEP14735 1019 aa17.52■□□□□ 0.39
SRPK1-201ENST00000346162 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms