RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 GSPT1P15170 499 aaKnown RBP15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 PUS3Q9BZE2 481 aaKnown RBP15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
CSNK1G3-201ENST00000345990 PDIA6Q15084 440 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 PYM1Q9BRP8 204 aaKnown RBP15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 DACH1Q9UI36 760 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 PDE6AP16499 860 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 GJB2P29033 226 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 RTKN2Q8IZC4 609 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 STX8Q9UNK0 236 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 SF3B3Q15393 1217 aaKnown RBP15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 SLC16A10Q8TF71 515 aa15.89■□□□□ 0.13
CSNK1G3-201ENST00000345990 DEKP35659 375 aaKnown RBP15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 TSR1Q2NL82 804 aaKnown RBP15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 CCDC24Q8N4L8 307 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 LLPHQ9BRT6 129 aaKnown RBP15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 SASH1O94885 1247 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 FAM227BQ96M60 508 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 CCDC93Q567U6 631 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 MFSD14BQ5SR56 506 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 FBXO41Q8TF61 875 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 CAMTA1Q9Y6Y1 1673 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 CCDC194A0A1B0GVG4 234 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 CLSTN1O94985 981 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 NLRP5P59047 1200 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 TNIP1Q15025 636 aa15.88■□□□□ 0.13
CSNK1G3-201ENST00000345990 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 TBC1D9BQ66K14 1250 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 ARMT1Q9H993 441 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 CALML3P27482 149 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 BCAMP50895 628 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 KCNQ4P56696 695 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 PICALMQ13492 652 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 ZMYM1Q5SVZ6 1142 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 GYG1P46976 350 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 COA1Q9GZY4 146 aa15.87■□□□□ 0.13
CSNK1G3-201ENST00000345990 TNFAIP1Q13829 316 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 DHX8Q14562 1220 aaKnown RBP15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 LINC00116Q8NCU8 138 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 PHKA1P46020 1223 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 FOXO4P98177 505 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 ATP8A2Q9NTI2 1148 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 SNX14Q9Y5W7 946 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 CSF1RP07333 972 aa15.86■□□□□ 0.13
CSNK1G3-201ENST00000345990 ZNF76P36508 570 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 AK2P54819 239 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 ITPK1Q13572 414 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 EPHA10Q5JZY3 1008 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 CRAMP1Q96RY5 1269 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 GTF2IP78347 998 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 NFIXQ14938 502 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 ATL3Q6DD88 541 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 CCDC192P0DO97 292 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
CSNK1G3-201ENST00000345990 MRE11P49959 708 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 DLGAP5Q15398 846 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 LZTS2Q9BRK4 669 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 SLC26A6Q9BXS9 759 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 VEZTQ9HBM0 779 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 KDM4AO75164 1064 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 STIM1Q13586 685 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 TTLL5Q6EMB2 1281 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 COL14A1Q05707 1796 aaKnown RBP15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 SHPRHQ149N8 1683 aa15.84■□□□□ 0.13
CSNK1G3-201ENST00000345990 CTAGE5O15320 804 aa15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 TMEM266Q2M3C6 531 aa15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 ZSCAN22P10073 491 aaPredicted RBP15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 AKNAD1Q5T1N1 836 aa15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 CAVIN1Q6NZI2 390 aaKnown RBP15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 TNMDQ9H2S6 317 aa15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 TTF2Q9UNY4 1162 aaKnown RBP15.83■□□□□ 0.13
CSNK1G3-201ENST00000345990 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
CSNK1G3-201ENST00000345990 AATFQ9NY61 560 aaKnown RBP eCLIP15.83■□□□□ 0.12
CSNK1G3-201ENST00000345990 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
CSNK1G3-201ENST00000345990 ADORA1P30542 326 aa15.83■□□□□ 0.12
CSNK1G3-201ENST00000345990 CEBPZQ03701 1054 aaKnown RBP15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 INTS5Q6P9B9 1019 aaKnown RBP15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 MPHOSPH6Q99547 160 aaKnown RBP15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 ALG1Q9BT22 464 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 H7C1D1 291 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 ADD2P35612 726 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 MAP4K1Q92918 833 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 CCDC39Q9UFE4 941 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 SMC2O95347 1197 aa15.82■□□□□ 0.12
CSNK1G3-201ENST00000345990 BAG4O95429 457 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms