RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 VIMP08670 466 aaKnown RBP19.67■□□□□ 0.74
SPAST-202ENST00000345662 RILPL1Q5EBL4 403 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 NAA16Q6N069 864 aaPredicted RBP19.67■□□□□ 0.74
SPAST-202ENST00000345662 CCDC26Q8TAB7 109 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 XAGE3Q8WTP9 111 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 JAKMIP2Q96AA8 810 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 TRIM7Q9C029 511 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 ZNF652Q9Y2D9 606 aa19.67■□□□□ 0.74
SPAST-202ENST00000345662 ACTN2P35609 894 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 MTX1Q13505 466 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 ATP2B3Q16720 1220 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 KCNK9Q9NPC2 374 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 NFE2L3Q9Y4A8 694 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 CALML3P27482 149 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 SLC4A4Q9Y6R1 1079 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 ZFYVE9O95405 1425 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 LMNTD2Q8IXW0 634 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 ACEP12821 1306 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 CTNND2Q9UQB3 1225 aa19.66■□□□□ 0.74
SPAST-202ENST00000345662 GNAQP50148 359 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 DAAM2Q86T65 1068 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 ATP2A1O14983 1001 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 CUTAO60888 179 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 GSPT1P15170 499 aaKnown RBP19.65■□□□□ 0.74
SPAST-202ENST00000345662 GPTP24298 496 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 TBC1D8BQ0IIM8 1120 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 RUFY4Q6ZNE9 571 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
SPAST-202ENST00000345662 COPS6Q7L5N1 327 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 CRACR2BQ8N4Y2 399 aaPredicted RBP19.65■□□□□ 0.74
SPAST-202ENST00000345662 TM6SF1Q9BZW5 370 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 SYNRGQ9UMZ2 1314 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 HELLSQ9NRZ9 838 aa19.65■□□□□ 0.74
SPAST-202ENST00000345662 CALM1P0DP23 149 aa19.64■□□□□ 0.74
SPAST-202ENST00000345662 CALM2P0DP24 149 aa19.64■□□□□ 0.74
SPAST-202ENST00000345662 CALM3P0DP25 149 aa19.64■□□□□ 0.74
SPAST-202ENST00000345662 MTHFSDQ2M296 383 aaKnown RBP19.64■□□□□ 0.74
SPAST-202ENST00000345662 LRRC45Q96CN5 670 aa19.64■□□□□ 0.74
SPAST-202ENST00000345662 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
SPAST-202ENST00000345662 PCK1P35558 622 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 SND1Q7KZF4 910 aaKnown RBP eCLIP19.64■□□□□ 0.73
SPAST-202ENST00000345662 KIAA1524Q8TCG1 905 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 SECISBP2LQ93073 1101 aaKnown RBP19.64■□□□□ 0.73
SPAST-202ENST00000345662 SERPINA10Q9UK55 444 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 RTL9Q8NET4 1388 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 ERMNQ8TAM6 284 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 ATP6V1AP38606 617 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 ADGRL1O94910 1474 aa19.64■□□□□ 0.73
SPAST-202ENST00000345662 CALCOCO2Q13137 446 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 ALDH3A1P30838 453 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 RXRAP19793 462 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 KRT9P35527 623 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 PPP1R2P41236 205 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 WHAMMP3Q1A5X7 153 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 CRNKL1Q9BZJ0 848 aaKnown RBP19.63■□□□□ 0.73
SPAST-202ENST00000345662 SSH2Q76I76 1423 aa19.63■□□□□ 0.73
SPAST-202ENST00000345662 SBNO2Q9Y2G9 1366 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 CCDC25Q86WR0 208 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 NKIRAS1Q9NYS0 192 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 ATP8B1O43520 1251 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 HEATR3Q7Z4Q2 680 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 NOC4LQ9BVI4 516 aaKnown RBP19.62■□□□□ 0.73
SPAST-202ENST00000345662 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 MCM7P33993 719 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 TFCP2Q12800 502 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 PAK2Q13177 524 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 DTHD1Q6ZMT9 781 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 SEC62Q99442 399 aaKnown RBP19.62■□□□□ 0.73
SPAST-202ENST00000345662 CABP5Q9NP86 173 aa19.62■□□□□ 0.73
SPAST-202ENST00000345662 PNMA8AQ86V59 439 aaPredicted RBP19.62■□□□□ 0.73
SPAST-202ENST00000345662 NCOA5Q9HCD5 579 aaKnown RBP19.62■□□□□ 0.73
SPAST-202ENST00000345662 G2E3Q7L622 706 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 TEX14Q8IWB6 1497 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 PSDA5PKW4 1024 aaPredicted RBP19.61■□□□□ 0.73
SPAST-202ENST00000345662 POLR2DO15514 142 aaKnown RBP19.61■□□□□ 0.73
SPAST-202ENST00000345662 ATP5DP30049 168 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 CWF19L2Q2TBE0 894 aaKnown RBP19.61■□□□□ 0.73
SPAST-202ENST00000345662 CAPN7Q9Y6W3 813 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 VWA3AA6NCI4 1184 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 NR1I2O75469 434 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 STMN2Q93045 179 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 NUP58Q9BVL2 599 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 MED4Q9NPJ6 270 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 MTMR6Q9Y217 621 aa19.61■□□□□ 0.73
SPAST-202ENST00000345662 CYP7A1P22680 504 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 CCDC174Q6PII3 467 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 KIAA1468Q9P260 1216 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 FMNL3Q8IVF7 1028 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 LDHCP07864 332 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 PPP4R3AQ6IN85 833 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 FAM227BQ96M60 508 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 KIF24Q5T7B8 1368 aa19.6■□□□□ 0.73
SPAST-202ENST00000345662 BAG3O95817 575 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms