RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SBNO1A3KN83 1393 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 ACTN2P35609 894 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 WTAPQ15007 396 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC155Q8N6L0 562 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC151A5D8V7 595 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 KIAA0753Q2KHM9 967 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC129Q6ZRS4 1044 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 BICC1Q9H694 974 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 DDX41Q9UJV9 622 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 MATR3P43243 847 aaKnown RBP eCLIP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CAVIN4Q5BKX8 364 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 SSH3Q8TE77 659 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC114Q96M63 670 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 NCBP1Q09161 790 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 KRT24Q2M2I5 525 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 SARM1Q6SZW1 724 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC42Q96M95 316 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 GNAT2P19087 354 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC82Q8N4S0 544 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 EXOC4Q96A65 974 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 LRRC2Q9BYS8 371 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 EFCAB6Q5THR3 1501 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 SNRPA1P09661 255 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 UQCRFS1P1P0C7P4 283 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 IGHMBP2P38935 993 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PLA2G4DQ86XP0 818 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 NDUFAB1O14561 156 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CETN2P41208 172 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 RRAGBQ5VZM2 374 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 ABCF2Q9UG63 623 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 MTMR6Q9Y217 621 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CDK12Q9NYV4 1490 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CPSF1Q10570 1443 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 KRT2P35908 639 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC122Q5T0U0 273 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 ANO1Q5XXA6 986 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC51Q96ER9 411 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PLA2R1Q13018 1463 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 GOLGA6BA6NDN3 693 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 RNF113AO15541 343 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 IDEP14735 1019 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PDE4BQ07343 736 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CEP57Q86XR8 500 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PLCD3Q8N3E9 789 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 IQCDQ96DY2 449 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PLVAPQ9BX97 442 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 VGLL3A8MV65 326 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 POLR2DO15514 142 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 SLC5A1P13866 664 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PRPHP41219 470 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 IFT20Q8IY31 132 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 ATRIPQ8WXE1 791 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 FAM227BQ96M60 508 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 DSCC1Q9BVC3 393 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 TRIM75PA6NK02 468 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 POSTNQ15063 836 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CPLX4Q7Z7G2 160 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 IGSF22Q8N9C0 903 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 ZRANB1Q9UGI0 708 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 SYNRGQ9UMZ2 1314 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 ANKRD18BA2A2Z9 1011 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 IKBKBO14920 756 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 HAND2P61296 217 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 LDHAL6AQ6ZMR3 332 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 FMNL3Q8IVF7 1028 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 RBM28Q9NW13 759 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 KCNH3Q9ULD8 1083 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PPP2R2CQ9Y2T4 447 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 ZFYVE16Q7Z3T8 1539 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 KIF4AO95239 1232 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 RTN1Q16799 776 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 CFAP58Q5T655 872 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 TRIML1Q8N9V2 468 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 PA2G4Q9UQ80 394 aaKnown RBP5.41□□□□□ -1.54
CSMD3-203ENST00000343508 MTMR7Q9Y216 660 aa5.41□□□□□ -1.54
CSMD3-203ENST00000343508 POGZQ7Z3K3 1410 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 FAM173BQ6P4H8 233 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 IQUBQ8NA54 791 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 LMBR1Q8WVP7 490 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 TMEM87BQ96K49 555 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 TPCN1Q9ULQ1 816 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 UHRF1BP1LA0JNW5 1464 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 ADCY9O60503 1353 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CALM1P0DP23 149 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CALM2P0DP24 149 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CALM3P0DP25 149 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 MAP2K2P36507 400 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 PHF23Q9BUL5 403 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-203ENST00000343508 LSG1Q9H089 658 aaKnown RBP5.4□□□□□ -1.54
CSMD3-203ENST00000343508 MYO1AQ9UBC5 1043 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 NRBP1Q9UHY1 535 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CHD1O14646 1710 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 TTC14Q96N46 770 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 ZHX3Q9H4I2 956 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 MYOM1P52179 1685 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CPA1P15085 419 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 PPP2R5BQ15173 497 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CYB5RLQ6IPT4 315 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CHST3Q7LGC8 479 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms