RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 NLRP2Q9NX02 1062 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 ADCY5O95622 1261 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 LIFRP42702 1097 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 KRT85P78386 507 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 CCZ1BP86790 482 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 CCZ1P86791 482 aaPredicted RBP9.57□□□□□ -0.88
CFAP54-201ENST00000342887 ADALQ6DHV7 355 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 BRF1Q92994 677 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 PRIMPOLQ96LW4 560 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 LY9Q9HBG7 655 aa9.57□□□□□ -0.88
CFAP54-201ENST00000342887 SPATA31A5Q5VU36 1347 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 SPATA31A7Q8IWB4 1347 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 FGAP02671 866 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 SEC23AQ15436 765 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 KIAA1211Q6ZU35 1233 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 PIH1D3Q9NQM4 214 aaKnown RBP9.56□□□□□ -0.88
CFAP54-201ENST00000342887 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
CFAP54-201ENST00000342887 ASAP1Q9ULH1 1129 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 RANBP6O60518 1105 aaKnown RBP9.56□□□□□ -0.88
CFAP54-201ENST00000342887 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
CFAP54-201ENST00000342887 ZNF75DP51815 510 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 CYB5R4Q7L1T6 521 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 TMEM139Q8IV31 216 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 FBXO18Q8NFZ0 1043 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 STRBPQ96SI9 672 aaKnown RBP9.56□□□□□ -0.88
CFAP54-201ENST00000342887 MROH5Q6ZUA9 1318 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 PAPPA2Q9BXP8 1791 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
CFAP54-201ENST00000342887 PTPDC1A2A3K4 754 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 PPP6R2O75170 966 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 PDE8BO95263 885 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 APTXQ7Z2E3 356 aaKnown RBP9.55□□□□□ -0.88
CFAP54-201ENST00000342887 STAG1Q8WVM7 1258 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 KIF23Q02241 960 aaPredicted RBP9.55□□□□□ -0.88
CFAP54-201ENST00000342887 LARP1BQ659C4 914 aaKnown RBP9.55□□□□□ -0.88
CFAP54-201ENST00000342887 SASS6Q6UVJ0 657 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
CFAP54-201ENST00000342887 CNTNAP4Q9C0A0 1308 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 M0R2N6 131 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 PIP4K2AP48426 406 aaPredicted RBP9.55□□□□□ -0.88
CFAP54-201ENST00000342887 TIMM10P62072 90 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 CCDC93Q567U6 631 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 GIMAP6Q6P9H5 292 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 USP28Q96RU2 1077 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 LARP6Q9BRS8 491 aaKnown RBP9.55□□□□□ -0.88
CFAP54-201ENST00000342887 PYCARDQ9ULZ3 195 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 AKAP2Q9Y2D5 859 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
CFAP54-201ENST00000342887 TBX2Q13207 712 aaPredicted RBP9.54□□□□□ -0.88
CFAP54-201ENST00000342887 CTAGE5O15320 804 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 TPM3P06753 285 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
CFAP54-201ENST00000342887 C11orf57Q6ZUT1 292 aaPredicted RBP9.54□□□□□ -0.88
CFAP54-201ENST00000342887 DDX46Q7L014 1031 aaKnown RBP9.54□□□□□ -0.88
CFAP54-201ENST00000342887 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 SIL1Q9H173 461 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 GREM2Q9H772 168 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 FANCGO15287 622 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 CCDC144BQ3MJ40 725 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 CCDC144CPQ8IYA2 1237 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 MED15Q96RN5 788 aa9.54□□□□□ -0.88
CFAP54-201ENST00000342887 FAM160A1Q05DH4 1040 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 BRAPQ7Z569 592 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 DNAJC10Q8IXB1 793 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 RIOK1Q9BRS2 568 aaKnown RBP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 DENND2AQ9ULE3 1009 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 PDE8AO60658 829 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 ZAP70P43403 619 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 SF3B3Q15393 1217 aaKnown RBP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 RESP18Q5W5W9 173 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 PCDHA7Q9UN72 937 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 TOB1P50616 345 aaPredicted RBP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 MAP3K11Q16584 847 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 TTLL5Q6EMB2 1281 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 FAM173BQ6P4H8 233 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 C15orf52Q6ZUT6 534 aaKnown RBP9.53□□□□□ -0.88
CFAP54-201ENST00000342887 DACT1Q9NYF0 836 aa9.53□□□□□ -0.88
CFAP54-201ENST00000342887 IKBKBO14920 756 aa9.52□□□□□ -0.88
CFAP54-201ENST00000342887 MYO1BO43795 1136 aa9.52□□□□□ -0.88
CFAP54-201ENST00000342887 NT5C2P49902 561 aa9.52□□□□□ -0.88
CFAP54-201ENST00000342887 HSP90AB3PQ58FF7 597 aa9.52□□□□□ -0.88
CFAP54-201ENST00000342887 IPO4Q8TEX9 1081 aaKnown RBP9.52□□□□□ -0.88
CFAP54-201ENST00000342887 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.88
CFAP54-201ENST00000342887 WDHD1O75717 1129 aaPredicted RBP9.52□□□□□ -0.89
CFAP54-201ENST00000342887 ZNF18P17022 549 aa9.52□□□□□ -0.89
CFAP54-201ENST00000342887 BMP6P22004 513 aa9.52□□□□□ -0.89
CFAP54-201ENST00000342887 CDC27P30260 824 aa9.52□□□□□ -0.89
CFAP54-201ENST00000342887 APOBRQ0VD83 1088 aa9.52□□□□□ -0.89
CFAP54-201ENST00000342887 ANKS1AQ92625 1134 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms