RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 C11orf57Q6ZUT1 292 aaPredicted RBP17■□□□□ 0.31
TDP2-201ENST00000341060 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
TDP2-201ENST00000341060 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
TDP2-201ENST00000341060 C8orf76Q96K31 380 aa17■□□□□ 0.31
TDP2-201ENST00000341060 PCDHA7Q9UN72 937 aa17■□□□□ 0.31
TDP2-201ENST00000341060 DRC7Q8IY82 874 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 RGS22Q8NE09 1264 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
TDP2-201ENST00000341060 CNNM1Q9NRU3 951 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 A0A1W2PQ27 194 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 A0A1W2PQ64 194 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 A0A1W2PQD8 194 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 GOLGA6L19H0YKK7 550 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 CYP19A1P11511 503 aaPredicted RBP16.99■□□□□ 0.31
TDP2-201ENST00000341060 BRAPQ7Z569 592 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
TDP2-201ENST00000341060 LINC00301Q8NCQ3 95 aa16.99■□□□□ 0.31
TDP2-201ENST00000341060 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
TDP2-201ENST00000341060 DOT1LQ8TEK3 1739 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
TDP2-201ENST00000341060 PDE8BO95263 885 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 YEATS4O95619 227 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 SLC9C2Q5TAH2 1124 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 C8orf37Q96NL8 207 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
TDP2-201ENST00000341060 CPLX1O14810 134 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 UBE3CQ15386 1083 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 KCNG4Q8TDN1 519 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 PDE8AO60658 829 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 ARID4AP29374 1257 aaPredicted RBP16.97■□□□□ 0.31
TDP2-201ENST00000341060 TRDNQ13061 729 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 MRFAP1L1Q96HT8 127 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 ANO10Q9NW15 660 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 TRMT112Q9UI30 125 aaKnown RBP16.97■□□□□ 0.31
TDP2-201ENST00000341060 ZBTB1Q9Y2K1 713 aa16.97■□□□□ 0.31
TDP2-201ENST00000341060 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
TDP2-201ENST00000341060 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
TDP2-201ENST00000341060 CLIC4Q9Y696 253 aa16.96■□□□□ 0.31
TDP2-201ENST00000341060 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
TDP2-201ENST00000341060 PRKCSHP14314 528 aaPredicted RBP16.96■□□□□ 0.3
TDP2-201ENST00000341060 LRMPQ12912 555 aa16.96■□□□□ 0.3
TDP2-201ENST00000341060 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.3
TDP2-201ENST00000341060 STK38Q15208 465 aa16.96■□□□□ 0.3
TDP2-201ENST00000341060 NGLY1Q96IV0 654 aa16.96■□□□□ 0.3
TDP2-201ENST00000341060 PIH1D3Q9NQM4 214 aaKnown RBP16.96■□□□□ 0.3
TDP2-201ENST00000341060 SLIT2O94813 1529 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 ERVV-1B6SEH8 477 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 POLR3DP05423 398 aaPredicted RBP16.95■□□□□ 0.3
TDP2-201ENST00000341060 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
TDP2-201ENST00000341060 CEP57L1Q8IYX8 460 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 LAMB2P55268 1798 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
TDP2-201ENST00000341060 A0A1B0GVL5 298 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 BECN2A8MW95 431 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 SPTLC2O15270 562 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 IDH1O75874 414 aaKnown RBP16.94■□□□□ 0.3
TDP2-201ENST00000341060 KIF23Q02241 960 aaPredicted RBP16.94■□□□□ 0.3
TDP2-201ENST00000341060 BCORQ6W2J9 1755 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 NEDD4P46934 1319 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 TCRBV5S4A2TA0A5A2 114 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 PDE6AP16499 860 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 IL6STP40189 918 aaPredicted RBP16.94■□□□□ 0.3
TDP2-201ENST00000341060 PHKA1P46020 1223 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 NDUFA8P51970 172 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
TDP2-201ENST00000341060 SF3A1Q15459 793 aaKnown RBP16.94■□□□□ 0.3
TDP2-201ENST00000341060 RAB11FIP4Q86YS3 637 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 NAT10Q9H0A0 1025 aaKnown RBP16.94■□□□□ 0.3
TDP2-201ENST00000341060 DENND2AQ9ULE3 1009 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 TBC1D2BQ9UPU7 963 aa16.94■□□□□ 0.3
TDP2-201ENST00000341060 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 SH2B2O14492 632 aaPredicted RBP16.93■□□□□ 0.3
TDP2-201ENST00000341060 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 CYB5R4Q7L1T6 521 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
TDP2-201ENST00000341060 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 MROH5Q6ZUA9 1318 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 CDKL5O76039 1030 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 FGFR2P21802 821 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 METAP2P50579 478 aaKnown RBP eCLIP16.93■□□□□ 0.3
TDP2-201ENST00000341060 SYNE3Q6ZMZ3 975 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 DZIP3Q86Y13 1208 aaKnown RBP16.93■□□□□ 0.3
TDP2-201ENST00000341060 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 LPIN2Q92539 896 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
TDP2-201ENST00000341060 APPP05067 770 aa16.92■□□□□ 0.3
TDP2-201ENST00000341060 ANO1Q5XXA6 986 aa16.92■□□□□ 0.3
TDP2-201ENST00000341060 APOA5Q6Q788 366 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms