RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 IL1R1P14778 569 aa18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 MCAMP43121 646 aa18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 SUPT20HQ8NEM7 779 aa18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 TDRD7Q8NHU6 1098 aaKnown RBP18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 EDC3Q96F86 508 aaKnown RBP18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 EYA3Q99504 573 aa18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 LIMCH1Q9UPQ0 1083 aa18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 COL1A1P02452 1464 aaPredicted RBP18.11■□□□□ 0.49
TUBB4B-201ENST00000340384 SLC27A2O14975 620 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 RASGRF1Q13972 1273 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 ANKRD1Q15327 319 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 TSGA10IPQ3SY00 556 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 CAVIN4Q5BKX8 364 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 RUFY3Q7L099 469 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
TUBB4B-201ENST00000340384 RPAP1Q9BWH6 1393 aaPredicted RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 YDJCA8MPS7 323 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 PPIP5K2O43314 1243 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 IARSP41252 1262 aaKnown RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 ZBTB22O15209 634 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 RNF113AO15541 343 aaKnown RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 AK2P54819 239 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 GPR162Q16538 588 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 ZGPATQ8N5A5 531 aaKnown RBP18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 COA1Q9GZY4 146 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 VPS33BQ9H267 617 aa18.09■□□□□ 0.49
TUBB4B-201ENST00000340384 MYH7P12883 1935 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 CHD4Q14839 1912 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 TRAK2O60296 914 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 ZMYM1Q5SVZ6 1142 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 BLOC1S2Q6QNY1 142 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 ZNF804AQ7Z570 1209 aa18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 ALDH8A1Q9H2A2 487 aaPredicted RBP18.08■□□□□ 0.48
TUBB4B-201ENST00000340384 AKAP11Q9UKA4 1901 aa18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 UQCRFS1P1P0C7P4 283 aa18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 TTF1Q15361 905 aaPredicted RBP18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 NOL8Q76FK4 1167 aaKnown RBP18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 LARGE2Q8N3Y3 721 aa18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.07■□□□□ 0.484e-8■■■□□ 18.8
TUBB4B-201ENST00000340384 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
TUBB4B-201ENST00000340384 ECE2O60344 883 aa18.06■□□□□ 0.48
TUBB4B-201ENST00000340384 ZAP70P43403 619 aa18.06■□□□□ 0.48
TUBB4B-201ENST00000340384 VPS37DQ86XT2 251 aa18.06■□□□□ 0.48
TUBB4B-201ENST00000340384 SPATA5Q8NB90 893 aa18.06■□□□□ 0.48
TUBB4B-201ENST00000340384 BAG4O95429 457 aaKnown RBP18.05■□□□□ 0.48
TUBB4B-201ENST00000340384 PODNQ7Z5L7 613 aa18.05■□□□□ 0.48
TUBB4B-201ENST00000340384 SCN9AQ15858 1988 aa18.05■□□□□ 0.48
TUBB4B-201ENST00000340384 PDIA4P13667 645 aaKnown RBP18.05■□□□□ 0.48
TUBB4B-201ENST00000340384 GRIK5Q16478 980 aa18.05■□□□□ 0.48
TUBB4B-201ENST00000340384 SEMA3EO15041 775 aa18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 HMGB1P09429 215 aaKnown RBP18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 LMNB1P20700 586 aa18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 ADCK5Q3MIX3 580 aa18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 MXD3Q9BW11 206 aa18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
TUBB4B-201ENST00000340384 SBF1O95248 1867 aa18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 GTF2IP78347 998 aa18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 PIH1D3Q9NQM4 214 aaKnown RBP18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 DENND2AQ9ULE3 1009 aa18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 ZNRF3Q9ULT6 936 aa18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 FAM205AQ6ZU69 1335 aa18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
TUBB4B-201ENST00000340384 ZNF646O15015 1829 aaPredicted RBP18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 FZD9O00144 591 aa18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 GRIN3BO60391 1043 aa18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 CHGBP05060 677 aa18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 CHAF1AQ13111 956 aaPredicted RBP18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 CERS5Q8N5B7 392 aa18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 SMC3Q9UQE7 1217 aa18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 PDS5AQ29RF7 1337 aaKnown RBP18.02■□□□□ 0.48
TUBB4B-201ENST00000340384 BRD1O95696 1058 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 CXCL9Q07325 125 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 APPBP2Q92624 585 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 CTNNA3Q9UI47 895 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 MAST3O60307 1309 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 RAD17O75943 681 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 CCDC88AQ3V6T2 1871 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 TTLL5Q6EMB2 1281 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 NIM1KQ8IY84 436 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 ZNF384Q8TF68 577 aa18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 SEC62Q99442 399 aaKnown RBP18.01■□□□□ 0.47
TUBB4B-201ENST00000340384 G3V3G9 751 aa18■□□□□ 0.47
TUBB4B-201ENST00000340384 DCAF8Q5TAQ9 597 aa18■□□□□ 0.47
TUBB4B-201ENST00000340384 C9orf131Q5VYM1 1079 aa18■□□□□ 0.47
TUBB4B-201ENST00000340384 SALL1Q9NSC2 1324 aa17.99■□□□□ 0.47
TUBB4B-201ENST00000340384 CPA1P15085 419 aa17.99■□□□□ 0.47
TUBB4B-201ENST00000340384 SLFNL1Q499Z3 407 aa17.99■□□□□ 0.47
TUBB4B-201ENST00000340384 L1TD1Q5T7N2 865 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms