RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZNF589Q86UQ0 364 aaPredicted RBP20.01■□□□□ 0.79
SHOX-201ENST00000334060 MIGA1Q8NAN2 632 aa20.01■□□□□ 0.79
SHOX-201ENST00000334060 OSBP2Q969R2 916 aa20.01■□□□□ 0.79
SHOX-201ENST00000334060 PUS7LQ9H0K6 701 aaKnown RBP20.01■□□□□ 0.79
SHOX-201ENST00000334060 M0R2C6 588 aa20.01■□□□□ 0.79
SHOX-201ENST00000334060 VIL1P09327 827 aaKnown RBP20■□□□□ 0.79
SHOX-201ENST00000334060 GMLQ99445 158 aa20■□□□□ 0.79
SHOX-201ENST00000334060 PDS5AQ29RF7 1337 aaKnown RBP20■□□□□ 0.79
SHOX-201ENST00000334060 SALL1Q9NSC2 1324 aa20■□□□□ 0.79
SHOX-201ENST00000334060 ADD2P35612 726 aa19.99■□□□□ 0.79
SHOX-201ENST00000334060 DYNLL1P63167 89 aaKnown RBP19.99■□□□□ 0.79
SHOX-201ENST00000334060 CIAPIN1Q6FI81 312 aa19.99■□□□□ 0.79
SHOX-201ENST00000334060 RSBN1LQ6PCB5 846 aaPredicted RBP19.99■□□□□ 0.79
SHOX-201ENST00000334060 WDR66Q8TBY9 1149 aa19.99■□□□□ 0.79
SHOX-201ENST00000334060 VPS33BQ9H267 617 aa19.99■□□□□ 0.79
SHOX-201ENST00000334060 TTF2Q9UNY4 1162 aaKnown RBP19.99■□□□□ 0.79
SHOX-201ENST00000334060 LDHBP07195 334 aaKnown RBP19.99■□□□□ 0.79
SHOX-201ENST00000334060 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
SHOX-201ENST00000334060 MYH7P12883 1935 aa19.99■□□□□ 0.79
SHOX-201ENST00000334060 GRIN3BO60391 1043 aa19.98■□□□□ 0.79
SHOX-201ENST00000334060 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
SHOX-201ENST00000334060 GMPSP49915 693 aaPredicted RBP19.97■□□□□ 0.79
SHOX-201ENST00000334060 MAST3O60307 1309 aa19.97■□□□□ 0.79
SHOX-201ENST00000334060 RNF113AO15541 343 aaKnown RBP19.97■□□□□ 0.79
SHOX-201ENST00000334060 CYP7A1P22680 504 aa19.97■□□□□ 0.79
SHOX-201ENST00000334060 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
SHOX-201ENST00000334060 FOXP2O15409 715 aa19.96■□□□□ 0.79
SHOX-201ENST00000334060 DZIP1Q86YF9 867 aaKnown RBP19.96■□□□□ 0.79
SHOX-201ENST00000334060 ASTN2O75129 1339 aaPredicted RBP19.96■□□□□ 0.79
SHOX-201ENST00000334060 CDC45O75419 566 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 EVX2Q03828 476 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 TTF1Q15361 905 aaPredicted RBP19.95■□□□□ 0.78
SHOX-201ENST00000334060 LCORLQ8N3X6 602 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 MAST2Q6P0Q8 1798 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 SMIM22K7EJ46 135 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 ZBTB22O15209 634 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 PRKAB2O43741 272 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 EIF6P56537 245 aaKnown RBP19.95■□□□□ 0.78
SHOX-201ENST00000334060 MAP3K12Q12852 859 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 ZMYM1Q5SVZ6 1142 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 NAA16Q6N069 864 aaPredicted RBP19.95■□□□□ 0.78
SHOX-201ENST00000334060 ARMT1Q9H993 441 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 AATFQ9NY61 560 aaKnown RBP eCLIP19.95■□□□□ 0.78
SHOX-201ENST00000334060 DAGLAQ9Y4D2 1042 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 MYH2Q9UKX2 1941 aa19.95■□□□□ 0.78
SHOX-201ENST00000334060 CACNB3P54284 484 aa19.94■□□□□ 0.78
SHOX-201ENST00000334060 SAMD7Q7Z3H4 446 aa19.94■□□□□ 0.78
SHOX-201ENST00000334060 EPS15P42566 896 aa19.94■□□□□ 0.78
SHOX-201ENST00000334060 TBC1D22AQ8WUA7 517 aa19.94■□□□□ 0.78
SHOX-201ENST00000334060 DIAPH3Q9NSV4 1193 aa19.94■□□□□ 0.78
SHOX-201ENST00000334060 MBD4O95243 580 aa19.93■□□□□ 0.78
SHOX-201ENST00000334060 RBM26Q5T8P6 1007 aaKnown RBP19.93■□□□□ 0.78
SHOX-201ENST00000334060 MICALL2Q8IY33 904 aa19.93■□□□□ 0.78
SHOX-201ENST00000334060 RIOK1Q9BRS2 568 aaKnown RBP19.93■□□□□ 0.78
SHOX-201ENST00000334060 CRKP46108 304 aa19.92■□□□□ 0.78
SHOX-201ENST00000334060 PTH1RQ03431 593 aa19.92■□□□□ 0.78
SHOX-201ENST00000334060 ESYT1Q9BSJ8 1104 aa19.92■□□□□ 0.78
SHOX-201ENST00000334060 MROH7-TTC4A0A0A0MT08 1334 aa19.92■□□□□ 0.78
SHOX-201ENST00000334060 APOBEC3HQ6NTF7 200 aaKnown RBP19.92■□□□□ 0.78
SHOX-201ENST00000334060 TRPM4Q8TD43 1214 aa19.92■□□□□ 0.78
SHOX-201ENST00000334060 APPBP2Q92624 585 aa19.92■□□□□ 0.78
SHOX-201ENST00000334060 PRMT6Q96LA8 375 aaPredicted RBP19.92■□□□□ 0.78
SHOX-201ENST00000334060 SGSM2O43147 1006 aa19.91■□□□□ 0.78
SHOX-201ENST00000334060 SLURP2P0DP57 97 aa19.91■□□□□ 0.78
SHOX-201ENST00000334060 BTDP43251 543 aa19.91■□□□□ 0.78
SHOX-201ENST00000334060 UBE3CQ15386 1083 aa19.91■□□□□ 0.78
SHOX-201ENST00000334060 SLC4A8Q2Y0W8 1093 aa19.91■□□□□ 0.78
SHOX-201ENST00000334060 TBC1D10BQ4KMP7 808 aaPredicted RBP19.91■□□□□ 0.78
SHOX-201ENST00000334060 SH3RF3Q8TEJ3 882 aaPredicted RBP19.91■□□□□ 0.78
SHOX-201ENST00000334060 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
SHOX-201ENST00000334060 GPAA1O43292 621 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 RBM5P52756 815 aaKnown RBP eCLIP19.9■□□□□ 0.78
SHOX-201ENST00000334060 NBPF9Q3BBW0 867 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 CFAP100Q494V2 611 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 ZNF526Q8TF50 670 aaPredicted RBP19.9■□□□□ 0.78
SHOX-201ENST00000334060 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.9■□□□□ 0.78
SHOX-201ENST00000334060 GAKO14976 1311 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 POTECB2RU33 542 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 USP17L8P0C7I0 530 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 TNIP1Q15025 636 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 GPC2Q8N158 579 aa19.9■□□□□ 0.78
SHOX-201ENST00000334060 ZGPATQ8N5A5 531 aaKnown RBP19.9■□□□□ 0.78
SHOX-201ENST00000334060 CNOT7Q9UIV1 285 aaKnown RBP19.9■□□□□ 0.78
SHOX-201ENST00000334060 MFAP1P55081 439 aaKnown RBP19.89■□□□□ 0.77
SHOX-201ENST00000334060 RHBDL3P58872 404 aa19.89■□□□□ 0.77
SHOX-201ENST00000334060 FKBP1AP62942 108 aaKnown RBP19.89■□□□□ 0.77
SHOX-201ENST00000334060 SPTY2D1Q68D10 685 aaPredicted RBP19.89■□□□□ 0.77
SHOX-201ENST00000334060 DLK2Q6UY11 383 aa19.89■□□□□ 0.77
SHOX-201ENST00000334060 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.77
SHOX-201ENST00000334060 CLRN2A0PK11 232 aa19.88■□□□□ 0.77
SHOX-201ENST00000334060 HIRAP54198 1017 aaPredicted RBP19.88■□□□□ 0.77
SHOX-201ENST00000334060 NFIAQ12857 509 aa19.88■□□□□ 0.77
SHOX-201ENST00000334060 AGBL3Q8NEM8 1001 aa19.88■□□□□ 0.77
SHOX-201ENST00000334060 TDRD3Q9H7E2 651 aaKnown RBP19.88■□□□□ 0.77
SHOX-201ENST00000334060 EPB41L4AQ9HCS5 686 aaPredicted RBP19.88■□□□□ 0.77
SHOX-201ENST00000334060 RFX7Q2KHR2 1363 aa19.88■□□□□ 0.77
SHOX-201ENST00000334060 COL9A3Q14050 684 aaPredicted RBP19.88■□□□□ 0.77
SHOX-201ENST00000334060 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
SHOX-201ENST00000334060 STRBPQ96SI9 672 aaKnown RBP19.88■□□□□ 0.77
SHOX-201ENST00000334060 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms