RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 PDE8AO60658 829 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 ZNF34Q8IZ26 560 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 SYNE4Q8N205 404 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 KBTBD3Q8NAB2 608 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 TTLL11Q8NHH1 800 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 TTC14Q96N46 770 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 PAG1Q9NWQ8 432 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 THSD7AQ9UPZ6 1657 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 UBN2Q6ZU65 1347 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 RIC1Q4ADV7 1423 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 ANKRD18BA2A2Z9 1011 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 GOLIM4O00461 696 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 SLC27A2O14975 620 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 BAG4O95429 457 aaKnown RBP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 IFIT1P09914 478 aaKnown RBP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 FECHP22830 423 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 ITGA6P23229 1130 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 AK2P54819 239 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 ITPK1Q13572 414 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 LAPTM4AQ15012 233 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 CCDC158Q5M9N0 1113 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 AK7Q96M32 723 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 JAKMIP1Q96N16 626 aaKnown RBP10.43□□□□□ -0.74
LSAMP-201ENST00000333617 GREM2Q9H772 168 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
LSAMP-201ENST00000333617 MYH13Q9UKX3 1938 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 LY75O60449 1722 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 LRP5O75197 1615 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 SH3TC1Q8TE82 1336 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 SCN7AQ01118 1682 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 TAF5LO75529 589 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 PKP1Q13835 747 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
LSAMP-201ENST00000333617 ADCK5Q3MIX3 580 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 MCMDC2Q4G0Z9 681 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 GORABQ5T7V8 394 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 VPS53Q5VIR6 699 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 PDRG1Q9NUG6 133 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 HMG20BQ9P0W2 317 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 DOCK2Q92608 1830 aa10.42□□□□□ -0.74
LSAMP-201ENST00000333617 RPAP1Q9BWH6 1393 aaPredicted RBP10.41□□□□□ -0.74
LSAMP-201ENST00000333617 KCNQ2O43526 872 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 ACTN4O43707 911 aaKnown RBP10.41□□□□□ -0.74
LSAMP-201ENST00000333617 CFHP08603 1231 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 PSMA5P28066 241 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 PARP10Q53GL7 1025 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 METTL24Q5JXM2 366 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 TTC39AQ5SRH9 613 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 PPP1R18Q6NYC8 613 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 LDHAL6AQ6ZMR3 332 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 FNBP4Q8N3X1 1017 aaPredicted RBP10.41□□□□□ -0.74
LSAMP-201ENST00000333617 XAGE2Q96GT9 111 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 CNNM1Q9NRU3 951 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 RIPOR2Q9Y4F9 1068 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 SPATA31A6Q5VVP1 1343 aa10.41□□□□□ -0.74
LSAMP-201ENST00000333617 ZPR1O75312 459 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 CAMTA2O94983 1202 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 CPA1P15085 419 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 ADORA1P30542 326 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 ATP2B3Q16720 1220 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 SUSD4Q5VX71 490 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 USPL1Q5W0Q7 1092 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 ZSCAN31Q96LW9 406 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-201ENST00000333617 UTP14AQ9BVJ6 771 aaKnown RBP10.4□□□□□ -0.74
LSAMP-201ENST00000333617 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.4□□□□□ -0.74
LSAMP-201ENST00000333617 HELLSQ9NRZ9 838 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 ZDHHC9Q9Y397 364 aa10.4□□□□□ -0.74
LSAMP-201ENST00000333617 ABCC12Q96J65 1359 aa10.4□□□□□ -0.75
LSAMP-201ENST00000333617 HSP90B1P14625 803 aaKnown RBP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 GGCXP38435 758 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 KRT32Q14532 448 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 LRRFIP1Q32MZ4 808 aaKnown RBP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 TSGA10IPQ3SY00 556 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 CCDC129Q6ZRS4 1044 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 USP21Q9UK80 565 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 RNF113AO15541 343 aaKnown RBP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 CHGBP05060 677 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 SLC10A3P09131 477 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 FKBP4Q02790 459 aaKnown RBP eCLIP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 MCTP1Q6DN14 999 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 BLOC1S2Q6QNY1 142 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 SEC62Q99442 399 aaKnown RBP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 SH2B1Q9NRF2 756 aaPredicted RBP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 NIP7Q9Y221 180 aaKnown RBP eCLIP10.39□□□□□ -0.75
LSAMP-201ENST00000333617 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 MYH15Q9Y2K3 1946 aa10.39□□□□□ -0.75
LSAMP-201ENST00000333617 MROH5Q6ZUA9 1318 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 COL24A1Q17RW2 1714 aa10.38□□□□□ -0.75
LSAMP-201ENST00000333617 FAM177BA6PVY3 158 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms