RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 FOXD4L4Q8WXT5 416 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-201ENST00000332118 RBSNQ9H1K0 784 aa16.09■□□□□ 0.17
SRPRA-201ENST00000332118 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
SRPRA-201ENST00000332118 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
SRPRA-201ENST00000332118 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
SRPRA-201ENST00000332118 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
SRPRA-201ENST00000332118 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-201ENST00000332118 EPB41L4AQ9HCS5 686 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-201ENST00000332118 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
SRPRA-201ENST00000332118 DDX60LQ5H9U9 1706 aaKnown RBP16.09■□□□□ 0.17
SRPRA-201ENST00000332118 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.17
SRPRA-201ENST00000332118 NASPP49321 788 aaPredicted RBP16.08■□□□□ 0.17
SRPRA-201ENST00000332118 RCAN1P53805 252 aa16.08■□□□□ 0.17
SRPRA-201ENST00000332118 TMEM87BQ96K49 555 aa16.08■□□□□ 0.17
SRPRA-201ENST00000332118 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
SRPRA-201ENST00000332118 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
SRPRA-201ENST00000332118 HS1BP3Q53T59 392 aa16.08■□□□□ 0.16
SRPRA-201ENST00000332118 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
SRPRA-201ENST00000332118 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
SRPRA-201ENST00000332118 SH2B2O14492 632 aaPredicted RBP16.07■□□□□ 0.16
SRPRA-201ENST00000332118 PRC1O43663 620 aa16.07■□□□□ 0.16
SRPRA-201ENST00000332118 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
SRPRA-201ENST00000332118 C15orf52Q6ZUT6 534 aaKnown RBP16.07■□□□□ 0.16
SRPRA-201ENST00000332118 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
SRPRA-201ENST00000332118 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
SRPRA-201ENST00000332118 LIFRP42702 1097 aa16.07■□□□□ 0.16
SRPRA-201ENST00000332118 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
SRPRA-201ENST00000332118 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
SRPRA-201ENST00000332118 FGRP09769 529 aa16.06■□□□□ 0.16
SRPRA-201ENST00000332118 BCAMP50895 628 aa16.06■□□□□ 0.16
SRPRA-201ENST00000332118 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-201ENST00000332118 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
SRPRA-201ENST00000332118 SYCE3A1L190 88 aa16.06■□□□□ 0.16
SRPRA-201ENST00000332118 VPS37CA5D8V6 355 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-201ENST00000332118 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
SRPRA-201ENST00000332118 IFNL3Q8IZI9 196 aa16.06■□□□□ 0.16
SRPRA-201ENST00000332118 TRPC5Q9UL62 973 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-201ENST00000332118 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
SRPRA-201ENST00000332118 DHX16O60231 1041 aaKnown RBP16.05■□□□□ 0.16
SRPRA-201ENST00000332118 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
SRPRA-201ENST00000332118 GIMAP6Q6P9H5 292 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
SRPRA-201ENST00000332118 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 CNNM2Q9H8M5 875 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 STK3Q13188 491 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 SETDB2Q96T68 719 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 DENND2AQ9ULE3 1009 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 ANGEL1Q9UNK9 670 aaKnown RBP16.05■□□□□ 0.16
SRPRA-201ENST00000332118 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 AFF2P51816 1311 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 NT5C2P49902 561 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
SRPRA-201ENST00000332118 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 LRRC2Q9BYS8 371 aa16.05■□□□□ 0.16
SRPRA-201ENST00000332118 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
SRPRA-201ENST00000332118 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
SRPRA-201ENST00000332118 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
SRPRA-201ENST00000332118 PCP11498 1178 aaKnown RBP16.04■□□□□ 0.16
SRPRA-201ENST00000332118 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
SRPRA-201ENST00000332118 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 RCOR1Q9UKL0 485 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 FOCADQ5VW36 1801 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 NEDD4P46934 1319 aa16.04■□□□□ 0.16
SRPRA-201ENST00000332118 GNPATO15228 680 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
SRPRA-201ENST00000332118 CELF1Q92879 486 aaKnown RBP16.03■□□□□ 0.16
SRPRA-201ENST00000332118 TACC3Q9Y6A5 838 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 CFAP45Q9UL16 551 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 ZPR1O75312 459 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 MBD4O95243 580 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 RPS8P62241 208 aaKnown RBP16.03■□□□□ 0.16
SRPRA-201ENST00000332118 RALYLQ86SE5 291 aaKnown RBP16.03■□□□□ 0.16
SRPRA-201ENST00000332118 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
SRPRA-201ENST00000332118 FIBPO43427 364 aa16.02■□□□□ 0.16
SRPRA-201ENST00000332118 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
SRPRA-201ENST00000332118 KRT23Q9C075 422 aa16.02■□□□□ 0.16
SRPRA-201ENST00000332118 SRP68Q9UHB9 627 aaKnown RBP16.02■□□□□ 0.16
SRPRA-201ENST00000332118 CDK5RAP2Q96SN8 1893 aa16.02■□□□□ 0.16
SRPRA-201ENST00000332118 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.15
SRPRA-201ENST00000332118 LCORLQ8N3X6 602 aa16.02■□□□□ 0.15
SRPRA-201ENST00000332118 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 SNAP23O00161 211 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 HAND2P61296 217 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 ZNF384Q8TF68 577 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 TRDNQ13061 729 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 NTRK3Q16288 839 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 CAVIN4Q5BKX8 364 aa16.01■□□□□ 0.15
SRPRA-201ENST00000332118 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
SRPRA-201ENST00000332118 KLRG2A4D1S0 409 aaPredicted RBP16■□□□□ 0.15
SRPRA-201ENST00000332118 FGD1P98174 961 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms