RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TBX22Q9Y458 520 aa13□□□□□ -0.33
GINS3-202ENST00000328514 TMEM94Q12767 1356 aa13□□□□□ -0.33
GINS3-202ENST00000328514 PFKFB1P16118 471 aa13□□□□□ -0.33
GINS3-202ENST00000328514 CCT2P78371 535 aaKnown RBP13□□□□□ -0.33
GINS3-202ENST00000328514 GORABQ5T7V8 394 aa13□□□□□ -0.33
GINS3-202ENST00000328514 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
GINS3-202ENST00000328514 KIFC2Q96AC6 838 aa13□□□□□ -0.33
GINS3-202ENST00000328514 RASSF4Q9H2L5 321 aa13□□□□□ -0.33
GINS3-202ENST00000328514 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
GINS3-202ENST00000328514 AMOTL2Q9Y2J4 779 aa13□□□□□ -0.33
GINS3-202ENST00000328514 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
GINS3-202ENST00000328514 CASQ1P31415 396 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 TUBB4BP68371 445 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 PPP2R3AQ06190 1150 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 ZMYM1Q5SVZ6 1142 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 ANO1Q5XXA6 986 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 PARD6BQ9BYG5 372 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
GINS3-202ENST00000328514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
GINS3-202ENST00000328514 RPS6KA5O75582 802 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 TOP1P11387 765 aaKnown RBP12.98□□□□□ -0.33
GINS3-202ENST00000328514 TXLNAP40222 546 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 NEXNQ0ZGT2 675 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 TFCP2Q12800 502 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 DPF2Q92785 391 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 ADAM21Q9UKJ8 722 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 BIN1O00499 593 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 PPP6R2O75170 966 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 SERPINC1P01008 464 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 USP5P45974 858 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 FOSBP53539 338 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 WDR24Q96S15 920 aa12.98□□□□□ -0.33
GINS3-202ENST00000328514 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
GINS3-202ENST00000328514 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 MYO1CO00159 1063 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 HSPD1P10809 573 aaKnown RBP12.97□□□□□ -0.33
GINS3-202ENST00000328514 LONRF2Q1L5Z9 754 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 CTR9Q6PD62 1173 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
GINS3-202ENST00000328514 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 METTL22Q9BUU2 404 aaPredicted RBP12.97□□□□□ -0.33
GINS3-202ENST00000328514 C19orf44Q9H6X5 657 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 GPR108Q9NPR9 543 aa12.97□□□□□ -0.33
GINS3-202ENST00000328514 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
GINS3-202ENST00000328514 MROH7-TTC4A0A0A0MT08 1334 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 WDR19Q8NEZ3 1342 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 PXDNQ92626 1479 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 ARHGAP23Q9P227 1491 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 CHGBP05060 677 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 ACTN2P35609 894 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 SYKP43405 635 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 GNG11P61952 73 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 KIF23Q02241 960 aaPredicted RBP12.96□□□□□ -0.33
GINS3-202ENST00000328514 TUBB2AQ13885 445 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 SRLQ86TD4 932 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 TUBB2BQ9BVA1 445 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 INTS13Q9NVM9 706 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 RAB21Q9UL25 225 aa12.96□□□□□ -0.33
GINS3-202ENST00000328514 SLIT3O75094 1523 aa12.96□□□□□ -0.34
GINS3-202ENST00000328514 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.34
GINS3-202ENST00000328514 IVLP07476 585 aa12.96□□□□□ -0.34
GINS3-202ENST00000328514 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.34
GINS3-202ENST00000328514 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.34
GINS3-202ENST00000328514 JMYQ8N9B5 988 aa12.96□□□□□ -0.34
GINS3-202ENST00000328514 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
GINS3-202ENST00000328514 TC2NQ8N9U0 490 aa12.95□□□□□ -0.34
GINS3-202ENST00000328514 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.95□□□□□ -0.34
GINS3-202ENST00000328514 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
GINS3-202ENST00000328514 HPS5Q9UPZ3 1129 aa12.95□□□□□ -0.34
GINS3-202ENST00000328514 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 H3BQF6 201 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 POLR3DP05423 398 aaPredicted RBP12.94□□□□□ -0.34
GINS3-202ENST00000328514 ZNF18P17022 549 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 OLFM4Q6UX06 510 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 SRGAP1Q7Z6B7 1085 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 KIF28PB7ZC32 967 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 TMEM232C9JQI7 657 aa12.94□□□□□ -0.34
GINS3-202ENST00000328514 TUBBP07437 444 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms