RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
TOP3A-201ENST00000321105 BAG3O95817 575 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 STX17P56962 302 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 CHRNDQ07001 517 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 TMC6Q7Z403 805 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 MNS1Q8NEH6 495 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
TOP3A-201ENST00000321105 CYP2D7A0A087X1C5 515 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 USP17L21D6R901 530 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 SCRN1Q12765 414 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 ENOX2Q16206 610 aaKnown RBP12.7□□□□□ -0.38
TOP3A-201ENST00000321105 CCDC43Q96MW1 224 aaKnown RBP12.7□□□□□ -0.38
TOP3A-201ENST00000321105 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 KRT23Q9C075 422 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 TMEM131LA2VDJ0 1609 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 TPM2P07951 284 aa12.7□□□□□ -0.38
TOP3A-201ENST00000321105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-201ENST00000321105 DHX58Q96C10 678 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 USP28Q96RU2 1077 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 SEC63Q9UGP8 760 aaKnown RBP12.69□□□□□ -0.38
TOP3A-201ENST00000321105 H7C1W4 665 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 LDHBP07195 334 aaKnown RBP12.69□□□□□ -0.38
TOP3A-201ENST00000321105 IDEP14735 1019 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 TANGO6Q9C0B7 1094 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 ST5P78524 1137 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 ERFEQ4G0M1 354 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 FAM200AQ8TCP9 573 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
TOP3A-201ENST00000321105 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
TOP3A-201ENST00000321105 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-201ENST00000321105 PTGS1P23219 599 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 SFPQP23246 707 aaKnown RBP eCLIP12.68□□□□□ -0.38
TOP3A-201ENST00000321105 PDIA6Q15084 440 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 NR1I2O75469 434 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 ATP10DQ9P241 1426 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 A0A0G2JLW4 131 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 ZNF174Q15697 407 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 FAM196AQ6ZSG2 479 aa12.68□□□□□ -0.38
TOP3A-201ENST00000321105 MCM7P33993 719 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 FILIP1LQ4L180 1135 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 KAZALD1Q96I82 304 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 TRIM37O94972 964 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 ZDHHC9Q9Y397 364 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 MCAMP43121 646 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 DYNLL1P63167 89 aaKnown RBP12.67□□□□□ -0.38
TOP3A-201ENST00000321105 STX1AQ16623 288 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
TOP3A-201ENST00000321105 PPFIBP1Q86W92 1011 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
TOP3A-201ENST00000321105 ERCC3P19447 782 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 DIS3L2Q8IYB7 885 aaKnown RBP12.67□□□□□ -0.38
TOP3A-201ENST00000321105 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 CCDC112Q8NEF3 446 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
TOP3A-201ENST00000321105 OFD1O75665 1012 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 LDHCP07864 332 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 TCP10Q12799 353 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
TOP3A-201ENST00000321105 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-201ENST00000321105 UBA7P41226 1012 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 KRT40Q6A162 431 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 TGFBRAP1Q8WUH2 860 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 AGLP35573 1532 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
TOP3A-201ENST00000321105 ZNF76P36508 570 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 EPS15P42566 896 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 KCNG4Q8TDN1 519 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 PPLO60437 1756 aa12.66□□□□□ -0.38
TOP3A-201ENST00000321105 MTX1Q13505 466 aa12.65□□□□□ -0.38
TOP3A-201ENST00000321105 DSCC1Q9BVC3 393 aa12.65□□□□□ -0.38
TOP3A-201ENST00000321105 MAGEC2Q9UBF1 373 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-201ENST00000321105 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
TOP3A-201ENST00000321105 V9GYY5 206 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-201ENST00000321105 VWA3AA6NCI4 1184 aa12.65□□□□□ -0.38
TOP3A-201ENST00000321105 CEP131Q9UPN4 1083 aa12.65□□□□□ -0.38
TOP3A-201ENST00000321105 SPTY2D1Q68D10 685 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-201ENST00000321105 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
TOP3A-201ENST00000321105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
TOP3A-201ENST00000321105 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-201ENST00000321105 NRKQ7Z2Y5 1582 aa12.64□□□□□ -0.39
TOP3A-201ENST00000321105 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
TOP3A-201ENST00000321105 DNA2P51530 1060 aa12.64□□□□□ -0.39
TOP3A-201ENST00000321105 CUL4AQ13619 759 aa12.64□□□□□ -0.39
TOP3A-201ENST00000321105 TEX11Q8IYF3 940 aa12.64□□□□□ -0.39
TOP3A-201ENST00000321105 EEF2KMTQ96G04 330 aa12.64□□□□□ -0.39
TOP3A-201ENST00000321105 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms