RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 CCNT1O60563 726 aaKnown RBP9.99□□□□□ -0.81
SSBP2-201ENST00000320672 CHMLP26374 656 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 KRT2P35908 639 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 BIRC3Q13489 604 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 PCF11O94913 1555 aaKnown RBP9.99□□□□□ -0.81
SSBP2-201ENST00000320672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.99□□□□□ -0.817e-7■■■■□ 22.1
SSBP2-201ENST00000320672 SCNN1DP51172 638 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 PPP1R16BQ96T49 567 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 C14orf93Q9H972 538 aaKnown RBP9.99□□□□□ -0.81
SSBP2-201ENST00000320672 ZAP70P43403 619 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 TXLNBQ8N3L3 684 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 KCNA6P17658 529 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 KLHL40Q2TBA0 621 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 TOPBP1Q92547 1522 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 TRAF5O00463 557 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 MAP9Q49MG5 647 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 UTP14CQ5TAP6 766 aaKnown RBP9.99□□□□□ -0.81
SSBP2-201ENST00000320672 OGFOD1Q8N543 542 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
SSBP2-201ENST00000320672 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 UQCRFS1P1P0C7P4 283 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 ZNF827Q17R98 1081 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 TBC1D5Q92609 795 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 PAGR1Q9BTK6 254 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 BSPRYQ5W0U4 402 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 IKBKGQ9Y6K9 419 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 NPHP3Q7Z494 1330 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 PDE4DQ08499 809 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 PKP1Q13835 747 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 CETN1Q12798 172 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 TTC19Q6DKK2 380 aaPredicted RBP9.98□□□□□ -0.81
SSBP2-201ENST00000320672 TEX11Q8IYF3 940 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 RNF169Q8NCN4 708 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 TGFBRAP1Q8WUH2 860 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 RRP36Q96EU6 259 aaKnown RBP9.98□□□□□ -0.81
SSBP2-201ENST00000320672 CTAGE5O15320 804 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 EAPPQ56P03 285 aaPredicted RBP9.98□□□□□ -0.81
SSBP2-201ENST00000320672 MGARPQ8TDB4 240 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 VGLL3A8MV65 326 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 LDHBP07195 334 aaKnown RBP9.98□□□□□ -0.81
SSBP2-201ENST00000320672 CEP112Q8N8E3 955 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 LEO1Q8WVC0 666 aaPredicted RBP9.98□□□□□ -0.81
SSBP2-201ENST00000320672 KRT79Q5XKE5 535 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 CARD6Q9BX69 1037 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
SSBP2-201ENST00000320672 PPIP5K1Q6PFW1 1433 aa9.98□□□□□ -0.81
SSBP2-201ENST00000320672 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 POLR2DO15514 142 aaKnown RBP9.97□□□□□ -0.81
SSBP2-201ENST00000320672 CAPN2P17655 700 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 RUFY3Q7L099 469 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 GPR101Q96P66 508 aaPredicted RBP9.97□□□□□ -0.81
SSBP2-201ENST00000320672 KRT23Q9C075 422 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 EHMT1Q9H9B1 1298 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 GCP02774 474 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 XAGE2Q96GT9 111 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SPDYE3A6NKU9 549 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 ACTN2P35609 894 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 CFAP58Q5T655 872 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 DNAJC10Q8IXB1 793 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
SSBP2-201ENST00000320672 KRT19P08727 400 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SLFNL1Q499Z3 407 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 CCDC42Q96M95 316 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 VPS54Q9P1Q0 977 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SNAP25P60880 206 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 CDC37L1Q7L3B6 337 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SLC27A2O14975 620 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 HOXC9P31274 260 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 ZBTB16Q05516 673 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 ADCY1Q08828 1119 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 NSMFQ6X4W1 530 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 SDR42E1Q8WUS8 393 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 USP26Q9BXU7 913 aa9.97□□□□□ -0.81
SSBP2-201ENST00000320672 RNF34Q969K3 372 aa9.96□□□□□ -0.81
SSBP2-201ENST00000320672 C6orf50Q9HD87 102 aa9.96□□□□□ -0.81
SSBP2-201ENST00000320672 NLRC4Q9NPP4 1024 aa9.96□□□□□ -0.81
SSBP2-201ENST00000320672 EPRSP07814 1512 aaKnown RBP9.96□□□□□ -0.81
SSBP2-201ENST00000320672 PPP1R7Q15435 360 aa9.96□□□□□ -0.81
SSBP2-201ENST00000320672 CFBP00751 764 aa9.96□□□□□ -0.81
SSBP2-201ENST00000320672 SMIM5Q71RC9 77 aa9.96□□□□□ -0.81
SSBP2-201ENST00000320672 TCP10L2B9ZVM9 353 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 VPS41P49754 854 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 ADKP55263 362 aaKnown RBP9.96□□□□□ -0.82
SSBP2-201ENST00000320672 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.82
SSBP2-201ENST00000320672 PNOCQ13519 176 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 SYNJ2BP-COX16A0A087WUM0 186 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 NDC80O14777 642 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 NEK11Q8NG66 645 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 COX16Q9P0S2 106 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 IL2RBP14784 551 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
SSBP2-201ENST00000320672 NOC4LQ9BVI4 516 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms