RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 TRIML1Q8N9V2 468 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 GMEB1Q9Y692 573 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 RPAP1Q9BWH6 1393 aaPredicted RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 NUGGCQ68CJ6 796 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 MAPK8IP1Q9UQF2 711 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 ANKRD30BQ9BXX2 1392 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
BDNF-201ENST00000314915 PARP1P09874 1014 aaKnown RBP10.56□□□□□ -0.72
BDNF-201ENST00000314915 ATP5JP18859 108 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 CA8P35219 290 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 TYRO3Q06418 890 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 NEK9Q8TD19 979 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 VIPAS39Q9H9C1 493 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 CBX8Q9HC52 389 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 CCDC73Q6ZRK6 1079 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 SLC40A1Q9NP59 571 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 CASKIN1Q8WXD9 1431 aa10.56□□□□□ -0.72
BDNF-201ENST00000314915 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
BDNF-201ENST00000314915 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 RNF40O75150 1001 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 HMMRO75330 724 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 MCM3P25205 808 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 LCA5Q86VQ0 697 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 GDPD2Q9HCC8 539 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 E9PCH4 1651 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 REREQ9P2R6 1566 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 PPP2R3AQ06190 1150 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 ANKRD13BQ86YJ7 626 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 DYDC1Q8WWB3 177 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 TBC1D31Q96DN5 1066 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 AGBL1Q96MI9 1066 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 IMPACTQ9P2X3 320 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 KDM5CP41229 1560 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 PKD2Q13563 968 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 CEP57L1Q8IYX8 460 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 ACSBG1Q96GR2 724 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 CORO1BQ9BR76 489 aa10.55□□□□□ -0.72
BDNF-201ENST00000314915 RABL2AQ9UBK7 228 aaPredicted RBP10.55□□□□□ -0.72
BDNF-201ENST00000314915 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 TAF4BQ92750 862 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 PHF24Q9UPV7 400 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 BECN2A8MW95 431 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 MBD4O95243 580 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 CNGA1P29973 690 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 IRAK1P51617 712 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 PPFIA1Q13136 1202 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 WHAMMP3Q1A5X7 153 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 CCHCR1Q8TD31 782 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 EXOC1Q9NV70 894 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 EVC2Q86UK5 1308 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 TMEM221A6NGB7 291 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 N4BP1O75113 896 aaKnown RBP10.54□□□□□ -0.72
BDNF-201ENST00000314915 SLF2Q8IX21 1173 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 KCNN1Q92952 543 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 SLC35B4Q969S0 331 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 PHACTR2O75167 634 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 KCNA2P16389 499 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 CUL4AQ13619 759 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 CLPPQ16740 277 aaPredicted RBP10.54□□□□□ -0.72
BDNF-201ENST00000314915 PRPF40BQ6NWY9 871 aaKnown RBP10.54□□□□□ -0.72
BDNF-201ENST00000314915 CYB5D1Q6P9G0 228 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 DDX12PQ92771 950 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
BDNF-201ENST00000314915 NAT2P11245 290 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 HOXA10P31260 410 aaPredicted RBP10.53□□□□□ -0.72
BDNF-201ENST00000314915 CASP8Q14790 479 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 GGA2Q9UJY4 613 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 RAB21Q9UL25 225 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 BUB1BO60566 1050 aaPredicted RBP10.53□□□□□ -0.72
BDNF-201ENST00000314915 AARSP49588 968 aaKnown RBP eCLIP10.53□□□□□ -0.72
BDNF-201ENST00000314915 RARSP54136 660 aaKnown RBP10.53□□□□□ -0.72
BDNF-201ENST00000314915 E4F1Q66K89 784 aaPredicted RBP10.53□□□□□ -0.72
BDNF-201ENST00000314915 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 MYO1AQ9UBC5 1043 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 DDX19BQ9UMR2 479 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 TMEM232C9JQI7 657 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 PENKP01210 267 aaPredicted RBP10.53□□□□□ -0.72
BDNF-201ENST00000314915 NSMCE1Q8WV22 266 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 PPP1R14BQ96C90 147 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
BDNF-201ENST00000314915 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
BDNF-201ENST00000314915 AATFQ9NY61 560 aaKnown RBP eCLIP10.53□□□□□ -0.72
BDNF-201ENST00000314915 RASSF10A6NK89 507 aa10.52□□□□□ -0.72
BDNF-201ENST00000314915 APAF1O14727 1248 aa10.52□□□□□ -0.72
BDNF-201ENST00000314915 EIF3HO15372 352 aaKnown RBP eCLIP10.52□□□□□ -0.72
BDNF-201ENST00000314915 MMEP08473 750 aa10.52□□□□□ -0.72
BDNF-201ENST00000314915 EVI5LQ96CN4 794 aa10.52□□□□□ -0.72
BDNF-201ENST00000314915 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.72
BDNF-201ENST00000314915 EBF2Q9HAK2 575 aa10.52□□□□□ -0.72
BDNF-201ENST00000314915 BLMHQ13867 455 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 ANO6Q4KMQ2 910 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 HOOK3Q86VS8 718 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 PEX5LQ8IYB4 626 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms