RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 TUBB4AP04350 444 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 HSP90AA4PQ58FG1 418 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 CCDC186Q7Z3E2 898 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 SELENOOQ9BVL4 669 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 INCENPQ9NQS7 918 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 MAST1Q9Y2H9 1570 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 PPP1R2P41236 205 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 TYRO3Q06418 890 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 KBTBD3Q8NAB2 608 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 BACH1O14867 736 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 DEXIO95424 95 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 KRT83P78385 493 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 COMMD10Q9Y6G5 202 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 B4E1Z4 1266 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 RXRAP19793 462 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 LMBR1Q8WVP7 490 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
AMBRA1-201ENST00000314845 CCDC175P0C221 793 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 LRRC45Q96CN5 670 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 GPAA1O43292 621 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 KIF4AO95239 1232 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 STAMBPO95630 424 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 RPS6KB1P23443 525 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 GRM1Q13255 1194 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 FAM98CQ17RN3 349 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 DPP8Q6V1X1 898 aaPredicted RBP13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 CCDC42Q96M95 316 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 IKBKGQ9Y6K9 419 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 USP19O94966 1318 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 SYT1P21579 422 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 PDE6BP35913 854 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 LLPHQ9BRT6 129 aaKnown RBP13.53□□□□□ -0.24
AMBRA1-201ENST00000314845 H0YIN7 160 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 PLCD1P51178 756 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 KIF5AQ12840 1032 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 PPP2R5BQ15173 497 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 MROH5Q6ZUA9 1318 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 KRT86O43790 486 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 MAATS1Q7Z4T9 603 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 CCDC65Q8IXS2 484 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 NEK11Q8NG66 645 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 PICK1Q9NRD5 415 aa13.52□□□□□ -0.24
AMBRA1-201ENST00000314845 CFAP43Q8NDM7 1665 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 CTR9Q6PD62 1173 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 MICALCLQ6ZW33 695 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 CTAGE15A4D2H0 777 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 CTAGE8P0CG41 777 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 LETM2Q2VYF4 491 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 CTAGE6Q86UF2 777 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 CTAGE4Q8IX94 777 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 KLHDC4Q8TBB5 520 aa13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
AMBRA1-201ENST00000314845 LMAN1P49257 510 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 MSANTD4Q8NCY6 345 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 TBC1D22AQ8WUA7 517 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 ZSWIM4Q9H7M6 989 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 ZNF594Q96JF6 807 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 NEO1Q92859 1461 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 SGSM2O43147 1006 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 PTGS1P23219 599 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 CEP83Q9Y592 693 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 ELP1O95163 1332 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 ERICH4A6NGS2 130 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 SLC27A2O14975 620 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 UBE4AQ14139 1066 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 DNAI1Q9UI46 699 aa13.51□□□□□ -0.25
AMBRA1-201ENST00000314845 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 PTPRTO14522 1441 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 VWA3AA6NCI4 1184 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 STX17P56962 302 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 BMS1Q14692 1282 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms