RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TPM4P67936 248 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
SKA3-202ENST00000314759 ANO1Q5XXA6 986 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 ANKLE2Q86XL3 938 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.56■□□□□ 0.08
SKA3-202ENST00000314759 DHX16O60231 1041 aaKnown RBP15.56■□□□□ 0.08
SKA3-202ENST00000314759 GORABQ5T7V8 394 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 MROH7-TTC4A0A0A0MT08 1334 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 CYP27B1O15528 508 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 FGAP02671 866 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 PNMA6AP0CW24 399 aaPredicted RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 KIF23Q02241 960 aaPredicted RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 ARHGAP29Q52LW3 1261 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 KRT28Q7Z3Y7 464 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 MB21D2Q8IYB1 491 aaPredicted RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 PUS3Q9BZE2 481 aaKnown RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 MEGF6O75095 1541 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 IKBKBO14920 756 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 MARCKSP29966 332 aaPredicted RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 ANTXR2P58335 489 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 IMMTQ16891 758 aaKnown RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 NBPF14Q5TI25 921 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 NBPF10Q6P3W6 841 aaKnown RBP15.55■□□□□ 0.08
SKA3-202ENST00000314759 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 CALCOCO1Q9P1Z2 691 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 TMEM94Q12767 1356 aa15.55■□□□□ 0.08
SKA3-202ENST00000314759 TULP2O00295 520 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 ETF1P62495 437 aaKnown RBP15.54■□□□□ 0.08
SKA3-202ENST00000314759 HOMER1Q86YM7 354 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 CWC25Q9NXE8 425 aaPredicted RBP15.54■□□□□ 0.08
SKA3-202ENST00000314759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
SKA3-202ENST00000314759 CPLX1O14810 134 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 NRDCO43847 1150 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 TUBB4AP04350 444 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 DHX8Q14562 1220 aaKnown RBP15.54■□□□□ 0.08
SKA3-202ENST00000314759 WASHC4Q2M389 1173 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 TTLL7Q6ZT98 887 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 DPF2Q92785 391 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 SLC39A14Q15043 492 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 DNAI1Q9UI46 699 aa15.54■□□□□ 0.08
SKA3-202ENST00000314759 FANCGO15287 622 aa15.53■□□□□ 0.08
SKA3-202ENST00000314759 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.53■□□□□ 0.08
SKA3-202ENST00000314759 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
SKA3-202ENST00000314759 NWD2Q9ULI1 1742 aa15.53■□□□□ 0.08
SKA3-202ENST00000314759 POLR3GO15318 223 aaPredicted RBP15.53■□□□□ 0.08
SKA3-202ENST00000314759 TRIM65Q6PJ69 517 aa15.53■□□□□ 0.08
SKA3-202ENST00000314759 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.53■□□□□ 0.08
SKA3-202ENST00000314759 SYKP43405 635 aa15.52■□□□□ 0.08
SKA3-202ENST00000314759 UBASH3AP57075 661 aa15.52■□□□□ 0.08
SKA3-202ENST00000314759 HSP90AB3PQ58FF7 597 aa15.52■□□□□ 0.08
SKA3-202ENST00000314759 AIFM3Q96NN9 605 aa15.52■□□□□ 0.08
SKA3-202ENST00000314759 TMX1Q9H3N1 280 aa15.52■□□□□ 0.08
SKA3-202ENST00000314759 CIAO1O76071 339 aa15.52■□□□□ 0.07
SKA3-202ENST00000314759 CABP4P57796 275 aa15.52■□□□□ 0.07
SKA3-202ENST00000314759 NCOA7Q8NI08 942 aa15.52■□□□□ 0.07
SKA3-202ENST00000314759 PUS7LQ9H0K6 701 aaKnown RBP15.52■□□□□ 0.07
SKA3-202ENST00000314759 HPSEQ9Y251 543 aa15.52■□□□□ 0.07
SKA3-202ENST00000314759 PHLPP2Q6ZVD8 1323 aa15.52■□□□□ 0.07
SKA3-202ENST00000314759 SEC31AO94979 1220 aaKnown RBP15.51■□□□□ 0.07
SKA3-202ENST00000314759 ADORA1P30542 326 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 PDE4CQ08493 712 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 SHC4Q6S5L8 630 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 EPC1Q9H2F5 836 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 ZRANB2O95218 330 aaKnown RBP eCLIP15.51■□□□□ 0.07
SKA3-202ENST00000314759 SCARF1Q14162 830 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 NEK11Q8NG66 645 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 CEP126Q9P2H0 1117 aa15.51■□□□□ 0.07
SKA3-202ENST00000314759 SERPINC1P01008 464 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 MYL5Q02045 173 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 GOLGA8FQ08AF8 430 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 GOLGA8DPQ0D2H9 430 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 PNOCQ13519 176 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 PTPN21Q16825 1174 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 REXO1L1PQ8IX06 675 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 UTP14AQ9BVJ6 771 aaKnown RBP15.5■□□□□ 0.07
SKA3-202ENST00000314759 CCP110O43303 1012 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 CFAP100Q494V2 611 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 CCDC158Q5M9N0 1113 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 TTC39AQ5SRH9 613 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 RALYLQ86SE5 291 aaKnown RBP15.5■□□□□ 0.07
SKA3-202ENST00000314759 ZCCHC17Q9NP64 241 aaKnown RBP15.5■□□□□ 0.07
SKA3-202ENST00000314759 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 DENND2AQ9ULE3 1009 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 TRPM3Q9HCF6 1732 aaPredicted RBP15.5■□□□□ 0.07
SKA3-202ENST00000314759 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 ZFYP08048 801 aaPredicted RBP15.5■□□□□ 0.07
SKA3-202ENST00000314759 LRRFIP1Q32MZ4 808 aaKnown RBP15.5■□□□□ 0.07
SKA3-202ENST00000314759 VPS37DQ86XT2 251 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 VSTM4Q8IW00 320 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 NKX2-3Q8TAU0 364 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 UBXN4Q92575 508 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 XAGE2Q96GT9 111 aa15.5■□□□□ 0.07
SKA3-202ENST00000314759 ZNF213O14771 459 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 PTPAQ15257 358 aa15.49■□□□□ 0.07
SKA3-202ENST00000314759 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms