RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 NUP98P52948 1817 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 CMA1P23946 247 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 ANTXR2P58335 489 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 HAND2P61296 217 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 SCARF1Q14162 830 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 ALX1Q15699 326 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 LDHAL6AQ6ZMR3 332 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 JMYQ8N9B5 988 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 FAM89AQ96GI7 184 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 TMEM87BQ96K49 555 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 TIGD1Q96MW7 591 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 LRP6O75581 1613 aa11.22□□□□□ -0.61
LSMEM1-201ENST00000312849 CTSWP56202 376 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 LRMPQ12912 555 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 TPD52L1Q16890 204 aaPredicted RBP11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 ANO1Q5XXA6 986 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 NLRP10Q86W26 655 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 AK7Q96M32 723 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
LSMEM1-201ENST00000312849 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 DOCK2Q92608 1830 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 KIF2AO00139 706 aaPredicted RBP11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 TNNT1P13805 278 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 ITGA6P23229 1130 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 KIF23Q02241 960 aaPredicted RBP11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 ANKRD7Q92527 254 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 CNNM1Q9NRU3 951 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 CLIC4Q9Y696 253 aa11.21□□□□□ -0.62
LSMEM1-201ENST00000312849 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 ECM29Q5VYK3 1845 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 PDE8AO60658 829 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 SLC3A2P08195 630 aaKnown RBP11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 MCAMP43121 646 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 NDUFA8P51970 172 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 NLRP12P59046 1061 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 CCDC144BQ3MJ40 725 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 SLC9C2Q5TAH2 1124 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 CCDC144CPQ8IYA2 1237 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 AOPEPQ8N6M6 819 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 PIGBQ92521 554 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 OSBPL5Q9H0X9 879 aaPredicted RBP11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 GPHNQ9NQX3 736 aaPredicted RBP11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
LSMEM1-201ENST00000312849 LRP5O75197 1615 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 A0A1B0GVL5 298 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 SH2B2O14492 632 aaPredicted RBP11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 MYO1BO43795 1136 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 NRDCO43847 1150 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 PPP6R2O75170 966 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 ZNF202O95125 648 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 PDE8BO95263 885 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 SMAP1Q8IYB5 467 aaPredicted RBP11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 VGLL2Q8N8G2 317 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 CCDC150Q8NCX0 1101 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 ASAP1Q9ULH1 1129 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 MROH5Q6ZUA9 1318 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 IRS4O14654 1257 aaPredicted RBP11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 SKILP12757 684 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 KCNJ6P48051 423 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 CCDC112Q8NEF3 446 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 WASF1Q92558 559 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 ALG1Q9BT22 464 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 GREM2Q9H772 168 aa11.19□□□□□ -0.62
LSMEM1-201ENST00000312849 STK36Q9NRP7 1315 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 FAM237AA0A1B0GTK4 181 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 CCDC69A6NI79 296 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 IKBKBO14920 756 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 TUBB4AP04350 444 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 PDE6AP16499 860 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 TRIM29Q14134 588 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 AXDND1Q5T1B0 1012 aaPredicted RBP11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 CEP135Q66GS9 1140 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 OTUD7BQ6GQQ9 843 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 SGMS1Q86VZ5 419 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 LPIN2Q92539 896 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 C16orf45Q96MC5 204 aaPredicted RBP11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 CNNM2Q9H8M5 875 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
LSMEM1-201ENST00000312849 ZBTB43O43298 467 aa11.17□□□□□ -0.62
LSMEM1-201ENST00000312849 CUTAO60888 179 aa11.17□□□□□ -0.62
LSMEM1-201ENST00000312849 APPP05067 770 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms