RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PXDNQ92626 1479 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
SPSB4-201ENST00000310546 NCAPHQ15003 741 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 SF3A1Q15459 793 aaKnown RBP20.78■□□□□ 0.92
SPSB4-201ENST00000310546 NEK1Q96PY6 1258 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 NHSL1Q5SYE7 1610 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 EVA1CP58658 441 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 SEC62Q99442 399 aaKnown RBP20.77■□□□□ 0.92
SPSB4-201ENST00000310546 SUGCTQ9HAC7 445 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 HIP1O00291 1037 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 MAP2K7O14733 419 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 SLC3A2P08195 630 aaKnown RBP20.77■□□□□ 0.92
SPSB4-201ENST00000310546 AKAP4Q5JQC9 854 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 PPM1EQ8WY54 764 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 ALDH8A1Q9H2A2 487 aaPredicted RBP20.77■□□□□ 0.92
SPSB4-201ENST00000310546 CHPF2Q9P2E5 772 aa20.77■□□□□ 0.92
SPSB4-201ENST00000310546 FAM208AQ9UK61 1670 aaKnown RBP20.77■□□□□ 0.92
SPSB4-201ENST00000310546 ATP2B1P20020 1258 aa20.77■□□□□ 0.91
SPSB4-201ENST00000310546 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.91
SPSB4-201ENST00000310546 TOP1P11387 765 aaKnown RBP20.76■□□□□ 0.91
SPSB4-201ENST00000310546 TSGA10IPQ3SY00 556 aa20.76■□□□□ 0.91
SPSB4-201ENST00000310546 CCT2P78371 535 aaKnown RBP20.76■□□□□ 0.91
SPSB4-201ENST00000310546 PDILTQ8N807 584 aa20.76■□□□□ 0.91
SPSB4-201ENST00000310546 PI4KAP2A4QPH2 592 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 APPP05067 770 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 TATP17735 454 aaPredicted RBP20.75■□□□□ 0.91
SPSB4-201ENST00000310546 PI4KAP1Q8N8J0 262 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 CCDC12Q8WUD4 166 aaPredicted RBP20.75■□□□□ 0.91
SPSB4-201ENST00000310546 CCDC102AQ96A19 550 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 BPIFA3Q9BQP9 254 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 HMG20BQ9P0W2 317 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 PUF60Q9UHX1 559 aaKnown RBP20.75■□□□□ 0.91
SPSB4-201ENST00000310546 KAT6BQ8WYB5 2073 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 ADAMTS2O95450 1211 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 JAKMIP3Q5VZ66 844 aa20.75■□□□□ 0.91
SPSB4-201ENST00000310546 NAA16Q6N069 864 aaPredicted RBP20.75■□□□□ 0.91
SPSB4-201ENST00000310546 PTPDC1A2A3K4 754 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 TMEM232C9JQI7 657 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 EIF4A1P60842 406 aaKnown RBP20.74■□□□□ 0.91
SPSB4-201ENST00000310546 KARSQ15046 597 aaKnown RBP20.74■□□□□ 0.91
SPSB4-201ENST00000310546 AMOTQ4VCS5 1084 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 HSP90AA4PQ58FG1 418 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 LMO7Q8WWI1 1683 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 NCAPD2Q15021 1401 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 CYP27B1O15528 508 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 BRD3Q15059 726 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 HDXQ7Z353 690 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 ARHGAP6O43182 974 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 ADALQ6DHV7 355 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 NSUN7Q8NE18 718 aaKnown RBP20.74■□□□□ 0.91
SPSB4-201ENST00000310546 NCOA5Q9HCD5 579 aaKnown RBP20.74■□□□□ 0.91
SPSB4-201ENST00000310546 AKAP2Q9Y2D5 859 aa20.74■□□□□ 0.91
SPSB4-201ENST00000310546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.74■□□□□ 0.91
SPSB4-201ENST00000310546 TNS3Q68CZ2 1445 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 MYL6BP14649 208 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 NLRP12P59046 1061 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 CHMP4BP1P59074 171 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 TOGARAM2Q6ZUX3 1019 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 EDC3Q96F86 508 aaKnown RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 IRX2Q9BZI1 471 aaPredicted RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 PRR29P0C7W0 189 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 CORO7P57737 925 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 BEND6Q5SZJ8 279 aaPredicted RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 DESI2Q9BSY9 194 aa20.73■□□□□ 0.91
SPSB4-201ENST00000310546 TLR7Q9NYK1 1049 aaKnown RBP20.73■□□□□ 0.91
SPSB4-201ENST00000310546 SOS2Q07890 1332 aaPredicted RBP20.72■□□□□ 0.91
SPSB4-201ENST00000310546 EIF3JO75822 258 aaKnown RBP20.72■□□□□ 0.91
SPSB4-201ENST00000310546 STK38Q15208 465 aa20.72■□□□□ 0.91
SPSB4-201ENST00000310546 BAG1Q99933 345 aaPredicted RBP20.72■□□□□ 0.91
SPSB4-201ENST00000310546 PSEN1P49768 467 aa20.72■□□□□ 0.91
SPSB4-201ENST00000310546 KRT32Q14532 448 aa20.72■□□□□ 0.91
SPSB4-201ENST00000310546 HSP90B2PQ58FF3 399 aa20.72■□□□□ 0.91
SPSB4-201ENST00000310546 ILDR1Q86SU0 546 aaPredicted RBP20.72■□□□□ 0.91
SPSB4-201ENST00000310546 SMARCC2Q8TAQ2 1214 aa20.72■□□□□ 0.91
SPSB4-201ENST00000310546 HSD3B7Q9H2F3 369 aa20.72■□□□□ 0.91
SPSB4-201ENST00000310546 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
SPSB4-201ENST00000310546 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 TAF5LO75529 589 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 POLR3DP05423 398 aaPredicted RBP20.71■□□□□ 0.91
SPSB4-201ENST00000310546 MMP14P50281 582 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 KIFC2Q96AC6 838 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 EAF2Q96CJ1 260 aaPredicted RBP20.71■□□□□ 0.91
SPSB4-201ENST00000310546 ZNF202O95125 648 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 CTDNEP1O95476 244 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 LRRC31Q6UY01 552 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 DNAAF4Q8WXU2 420 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 CAMTA1Q9Y6Y1 1673 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
SPSB4-201ENST00000310546 BEND3Q5T5X7 828 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 CNNM3Q8NE01 707 aa20.71■□□□□ 0.91
SPSB4-201ENST00000310546 MKRN1Q9UHC7 482 aaKnown RBP20.71■□□□□ 0.91
SPSB4-201ENST00000310546 CBFA2T2O43439 604 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 ADKP55263 362 aaKnown RBP20.7■□□□□ 0.9
SPSB4-201ENST00000310546 FCHSD1Q86WN1 690 aa20.7■□□□□ 0.9
SPSB4-201ENST00000310546 VSTM4Q8IW00 320 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms