RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 NBPF3Q9H094 633 aa26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 DENND2AQ9ULE3 1009 aa26.58■■□□□ 1.85
PDLIM2-202ENST00000308354 CYP7A1P22680 504 aa26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 APOBRQ0VD83 1088 aa26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 GPT2Q8TD30 523 aa26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 CRY2Q49AN0 593 aa26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 CAVIN1Q6NZI2 390 aaKnown RBP26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 GPR101Q96P66 508 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 EPB41L4AQ9HCS5 686 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 GPHNQ9NQX3 736 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-202ENST00000308354 STX6O43752 255 aa26.56■■□□□ 1.84
PDLIM2-202ENST00000308354 PANK2Q9BZ23 570 aa26.56■■□□□ 1.84
PDLIM2-202ENST00000308354 MRE11P49959 708 aa26.55■■□□□ 1.84
PDLIM2-202ENST00000308354 CHAF1AQ13111 956 aaPredicted RBP26.55■■□□□ 1.84
PDLIM2-202ENST00000308354 GRPEL1Q9HAV7 217 aa26.55■■□□□ 1.84
PDLIM2-202ENST00000308354 ISY1Q9ULR0 285 aaKnown RBP26.55■■□□□ 1.84
PDLIM2-202ENST00000308354 PATL2C9JE40 543 aaKnown RBP26.55■■□□□ 1.84
PDLIM2-202ENST00000308354 TBC1D10CQ8IV04 446 aa26.55■■□□□ 1.84
PDLIM2-202ENST00000308354 IFNL3Q8IZI9 196 aa26.54■■□□□ 1.84
PDLIM2-202ENST00000308354 NKX2-3Q8TAU0 364 aa26.54■■□□□ 1.84
PDLIM2-202ENST00000308354 NAP1L2Q9ULW6 460 aaPredicted RBP26.54■■□□□ 1.84
PDLIM2-202ENST00000308354 GTF3C6Q969F1 213 aa26.54■■□□□ 1.84
PDLIM2-202ENST00000308354 SLC4A4Q9Y6R1 1079 aa26.54■■□□□ 1.84
PDLIM2-202ENST00000308354 GSG1L2A8MUP6 293 aa26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 INCENPQ9NQS7 918 aa26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 ZSCAN22P10073 491 aaPredicted RBP26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 MB21D2Q8IYB1 491 aaPredicted RBP26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 NCOA7Q8NI08 942 aa26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 ZNF384Q8TF68 577 aa26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 RBM17Q96I25 401 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 NAPBQ9H115 298 aa26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 NSFL1CQ9UNZ2 370 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-202ENST00000308354 IRS2Q9Y4H2 1338 aa26.52■■□□□ 1.84
PDLIM2-202ENST00000308354 GPSM2P81274 684 aa26.52■■□□□ 1.84
PDLIM2-202ENST00000308354 SCRN1Q12765 414 aa26.52■■□□□ 1.84
PDLIM2-202ENST00000308354 RALYLQ86SE5 291 aaKnown RBP26.52■■□□□ 1.84
PDLIM2-202ENST00000308354 AGXT2Q9BYV1 514 aa26.52■■□□□ 1.84
PDLIM2-202ENST00000308354 JAK2O60674 1132 aa26.51■■□□□ 1.84
PDLIM2-202ENST00000308354 XDHP47989 1333 aa26.51■■□□□ 1.83
PDLIM2-202ENST00000308354 PRC1O43663 620 aa26.51■■□□□ 1.83
PDLIM2-202ENST00000308354 ANTXR2P58335 489 aa26.51■■□□□ 1.83
PDLIM2-202ENST00000308354 CCT2P78371 535 aaKnown RBP26.51■■□□□ 1.83
PDLIM2-202ENST00000308354 MSL1Q68DK7 614 aa26.51■■□□□ 1.83
PDLIM2-202ENST00000308354 SEMA3EO15041 775 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 MCM5P33992 734 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 NLGN1Q8N2Q7 840 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 GDPD2Q9HCC8 539 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 RBM27Q9P2N5 1060 aaKnown RBP26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 VPS37CA5D8V6 355 aaPredicted RBP26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 CTDSPL2Q05D32 466 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 ZSCAN23Q3MJ62 389 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 LARP1BQ659C4 914 aaKnown RBP26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 SDR42E1Q8WUS8 393 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 LEMD3Q9Y2U8 911 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 PNPLA7Q6ZV29 1317 aa26.5■■□□□ 1.83
PDLIM2-202ENST00000308354 HMGB2P26583 209 aaKnown RBP26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 PRDX5P30044 214 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 NAA16Q6N069 864 aaPredicted RBP26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 NCOA5Q9HCD5 579 aaKnown RBP26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 MTMR6Q9Y217 621 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 MAGEB6P1A0A0J9YX57 407 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 PPFIA3O75145 1194 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 TDO2P48775 406 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 DYNLL1P63167 89 aaKnown RBP26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 ALX1Q15699 326 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 STK11IPQ8N1F8 1099 aa26.49■■□□□ 1.83
PDLIM2-202ENST00000308354 PFKFB2O60825 505 aa26.48■■□□□ 1.83
PDLIM2-202ENST00000308354 TRDNQ13061 729 aa26.48■■□□□ 1.83
PDLIM2-202ENST00000308354 DDX11Q96FC9 970 aa26.48■■□□□ 1.83
PDLIM2-202ENST00000308354 MECOMQ03112 1051 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 NEDD4P46934 1319 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 B4E1Z4 1266 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 UFL1O94874 794 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 F13A1P00488 732 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 MMP10P09238 476 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 PDIA3P30101 505 aaKnown RBP26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 NSUN4Q96CB9 384 aaKnown RBP26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 CACNA1SQ13698 1873 aa26.47■■□□□ 1.83
PDLIM2-202ENST00000308354 GNAT2P19087 354 aa26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 HOXA10P31260 410 aaPredicted RBP26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 CYB5R4Q7L1T6 521 aa26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 RIOK1Q9BRS2 568 aaKnown RBP26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 TACC3Q9Y6A5 838 aa26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 RAB11FIP4Q86YS3 637 aa26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 NACAP1Q9BZK3 213 aa26.46■■□□□ 1.83
PDLIM2-202ENST00000308354 KLRG2A4D1S0 409 aaPredicted RBP26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 ZNF445P59923 1031 aa26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 TMEM63CQ9P1W3 806 aa26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 BBOX1O75936 387 aa26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 MBD3O95983 291 aa26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 EN1Q05925 392 aaPredicted RBP26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 EZH2Q15910 746 aaKnown RBP26.45■■□□□ 1.82
PDLIM2-202ENST00000308354 ZMYM6O95789 1325 aa26.44■■□□□ 1.82
PDLIM2-202ENST00000308354 CDC37L1Q7L3B6 337 aa26.44■■□□□ 1.82
PDLIM2-202ENST00000308354 USP48Q86UV5 1035 aa26.44■■□□□ 1.82
PDLIM2-202ENST00000308354 CNPY2Q9Y2B0 182 aa26.44■■□□□ 1.82
PDLIM2-202ENST00000308354 MYH13Q9UKX3 1938 aa26.44■■□□□ 1.82
PDLIM2-202ENST00000308354 CTDNEP1O95476 244 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 FERMT3Q86UX7 667 aa26.43■■□□□ 1.82
PDLIM2-202ENST00000308354 FLAD1Q8NFF5 587 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms