RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CCT6AP40227 531 aaKnown RBP14.98□□□□□ -0.01
TRIM56-201ENST00000306085 IL1RL1Q01638 556 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 Q9H521 79 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 PPP4R1Q8TF05 950 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 DHX58Q96C10 678 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 WTAPQ15007 396 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 MYCBPQ99417 103 aaPredicted RBP14.98□□□□□ -0.01
TRIM56-201ENST00000306085 BCAP29Q9UHQ4 241 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 PROSER2Q86WR7 435 aaPredicted RBP14.97□□□□□ -0.01
TRIM56-201ENST00000306085 FAM200AQ8TCP9 573 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 RASSF2P50749 326 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 DENND2CQ68D51 928 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 HNRNPCL2B2RXH8 293 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 HNRNPCL1O60812 293 aaKnown RBP14.97□□□□□ -0.01
TRIM56-201ENST00000306085 NAPAP54920 295 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 EVCP57679 992 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 SLC8A3P57103 927 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 TMED1Q13445 227 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 BAG5Q9UL15 447 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 SERPINB6P35237 376 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 HDAC9Q9UKV0 1011 aa14.97□□□□□ -0.01
TRIM56-201ENST00000306085 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 ZRANB2O95218 330 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRIM56-201ENST00000306085 HARSP12081 509 aaKnown RBP14.96□□□□□ -0.01
TRIM56-201ENST00000306085 DUSP27Q5VZP5 1158 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 TRMT112Q9UI30 125 aaKnown RBP14.96□□□□□ -0.01
TRIM56-201ENST00000306085 CCDC88BA6NC98 1476 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 STX17P56962 302 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 STAG1Q8WVM7 1258 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 NUB1Q9Y5A7 615 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 GOLGA6BA6NDN3 693 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 U2AF2P26368 475 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRIM56-201ENST00000306085 MRPS27Q92552 414 aaKnown RBP14.96□□□□□ -0.01
TRIM56-201ENST00000306085 ALG1Q9BT22 464 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 NACA2Q9H009 215 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 PPP1R9AQ9ULJ8 1098 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 JADE1Q6IE81 842 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 WAPLQ7Z5K2 1190 aa14.96□□□□□ -0.01
TRIM56-201ENST00000306085 RPAP2Q8IXW5 612 aaPredicted RBP14.96□□□□□ -0.01
TRIM56-201ENST00000306085 SP4Q02446 784 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 RTN1Q16799 776 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 WDR44Q5JSH3 913 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 RPAINQ86UA6 219 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 IFT20Q8IY31 132 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 EVI5LQ96CN4 794 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 IFNKQ9P0W0 207 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 BMP15O95972 392 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 SH3BGRP55822 239 aaPredicted RBP14.96□□□□□ -0.02
TRIM56-201ENST00000306085 CDK19Q9BWU1 502 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 LRRC2Q9BYS8 371 aa14.96□□□□□ -0.02
TRIM56-201ENST00000306085 KRT15P19012 456 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 CASP2P42575 452 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 CTNND2Q9UQB3 1225 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
TRIM56-201ENST00000306085 HS2ST1Q7LGA3 356 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 ASIC3Q9UHC3 531 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 ZSCAN22P10073 491 aaPredicted RBP14.95□□□□□ -0.02
TRIM56-201ENST00000306085 BIRC3Q13489 604 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 ANKRD20A3Q5VUR7 823 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 TSHZ3Q63HK5 1081 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 EFCC1Q9HA90 598 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 CCDC93Q567U6 631 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 BSPRYQ5W0U4 402 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 KSR1Q8IVT5 923 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 ORC6Q9Y5N6 252 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 POMGNT1Q8WZA1 660 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 PLCB1Q9NQ66 1216 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 SPDYE3A6NKU9 549 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 POLD1P28340 1107 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 SLC12A2P55011 1212 aa14.95□□□□□ -0.02
TRIM56-201ENST00000306085 PPP4R4Q6NUP7 873 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 CUX1P39880 1505 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 NECAB1Q8N987 351 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 CRNKL1Q9BZJ0 848 aaKnown RBP14.94□□□□□ -0.02
TRIM56-201ENST00000306085 TUBB4AP04350 444 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 CNGA4Q8IV77 575 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 RBSNQ9H1K0 784 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.94□□□□□ -0.02
TRIM56-201ENST00000306085 PHLDB3Q6NSJ2 640 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 CABS1Q96KC9 395 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 SNRKQ9NRH2 765 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
TRIM56-201ENST00000306085 KLHL40Q2TBA0 621 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 KLHDC4Q8TBB5 520 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 SUFUQ9UMX1 484 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 NOP9Q86U38 636 aaKnown RBP14.94□□□□□ -0.02
TRIM56-201ENST00000306085 TYRO3Q06418 890 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 PLIN2Q99541 437 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 SFMBT1Q9UHJ3 866 aa14.94□□□□□ -0.02
TRIM56-201ENST00000306085 NUDCD3Q8IVD9 361 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 ZBTB43O43298 467 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 TBC1D9Q6ZT07 1266 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms