RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 NEXMIFQ5QGS0 1516 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 COL9A3Q14050 684 aaPredicted RBP14.9□□□□□ -0.02
TRIM35-201ENST00000305364 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 IGSF1Q8N6C5 1336 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 ATP5JP18859 108 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 IARSP41252 1262 aaKnown RBP14.9□□□□□ -0.02
TRIM35-201ENST00000305364 TIMM10P62072 90 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 AMOTL2Q9Y2J4 779 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 AKR1B15C9JRZ8 316 aaPredicted RBP14.9□□□□□ -0.02
TRIM35-201ENST00000305364 HOXB7P09629 217 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 SPECC1LQ69YQ0 1117 aa14.9□□□□□ -0.02
TRIM35-201ENST00000305364 LRRC59Q96AG4 307 aaKnown RBP14.9□□□□□ -0.02
TRIM35-201ENST00000305364 LMBR1LQ6UX01 489 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 KBTBD3Q8NAB2 608 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 FBXO18Q8NFZ0 1043 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 ERICH2A1L162 156 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 KIAA0754O94854 1291 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 ANKRD13DQ6ZTN6 518 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 DBNLQ9UJU6 430 aaKnown RBP14.89□□□□□ -0.03
TRIM35-201ENST00000305364 KCNH3Q9ULD8 1083 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 AFMP43652 599 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 GJB4Q9NTQ9 266 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 FAN1Q9Y2M0 1017 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 CHD1O14646 1710 aa14.89□□□□□ -0.03
TRIM35-201ENST00000305364 TMEM232C9JQI7 657 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 CMA1P23946 247 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 USP8P40818 1118 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 NUP133Q8WUM0 1156 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 CARMIL3Q8ND23 1372 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 SHTN1A0MZ66 631 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 CCDC151A5D8V7 595 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
TRIM35-201ENST00000305364 KIAA1328Q86T90 577 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 NUTM2AQ8IVF1 878 aaPredicted RBP14.88□□□□□ -0.03
TRIM35-201ENST00000305364 ANKRD24Q8TF21 1146 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 PLEKHG3A1L390 1219 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 IKBKBO14920 756 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 CHGBP05060 677 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 WDR24Q96S15 920 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 RABEP2Q9H5N1 569 aa14.88□□□□□ -0.03
TRIM35-201ENST00000305364 GOLGA8AA7E2F4 631 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 N4BP3O15049 544 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 PIP4K2BP78356 416 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 ZNF827Q17R98 1081 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 IGSF22Q8N9C0 903 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 ZNF274Q96GC6 653 aaPredicted RBP14.87□□□□□ -0.03
TRIM35-201ENST00000305364 IBSPP21815 317 aaPredicted RBP14.87□□□□□ -0.03
TRIM35-201ENST00000305364 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 AKAP4Q5JQC9 854 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 DPF2Q92785 391 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 GDAP1L1Q96MZ0 367 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 CLIC6Q96NY7 704 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 PLEKHA4Q9H4M7 779 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 EFCC1Q9HA90 598 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 STX10O60499 249 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 PPM1EQ8WY54 764 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 USP42Q9H9J4 1324 aaKnown RBP14.87□□□□□ -0.03
TRIM35-201ENST00000305364 CPS1P31327 1500 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 FCHSD1Q86WN1 690 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 VSTM4Q8IW00 320 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 PCDHA5Q9Y5H7 936 aa14.87□□□□□ -0.03
TRIM35-201ENST00000305364 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 NAP1L1P55209 391 aaKnown RBP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 PAXIP1Q6ZW49 1069 aaPredicted RBP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 KCNB2Q92953 911 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 FAM107BQ9H098 131 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 GPHNQ9NQX3 736 aaPredicted RBP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 DDX21Q9NR30 783 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 GUCA1BQ9UMX6 200 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 ALKQ9UM73 1620 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 RNF113AO15541 343 aaKnown RBP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 WWC2Q6AWC2 1192 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 ENGASEQ8NFI3 743 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 MLH3Q9UHC1 1453 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 CAPZA3Q96KX2 299 aa14.86□□□□□ -0.03
TRIM35-201ENST00000305364 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRIM35-201ENST00000305364 AFAP1L1Q8TED9 768 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 ALDH8A1Q9H2A2 487 aaPredicted RBP14.85□□□□□ -0.03
TRIM35-201ENST00000305364 CENPHQ9H3R5 247 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 POLR3EQ9NVU0 708 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 TBC1D8O95759 1140 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 CCDC57Q2TAC2 916 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 LONRF3Q496Y0 759 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 DNAJC21Q5F1R6 531 aaKnown RBP14.85□□□□□ -0.03
TRIM35-201ENST00000305364 VPS37DQ86XT2 251 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 PARP3Q9Y6F1 533 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 KDRP35968 1356 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 POLR2DO15514 142 aaKnown RBP14.85□□□□□ -0.03
TRIM35-201ENST00000305364 HSPD1P10809 573 aaKnown RBP14.85□□□□□ -0.03
TRIM35-201ENST00000305364 MCM3P25205 808 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
TRIM35-201ENST00000305364 TOGARAM2Q6ZUX3 1019 aa14.85□□□□□ -0.03
TRIM35-201ENST00000305364 PHKBQ93100 1093 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms