RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 DNAJC25Q9H1X3 360 aa7.19□□□□□ -1.26
VCAM1-201ENST00000294728 YBX3P16989 372 aaKnown RBP eCLIP7.18□□□□□ -1.26
VCAM1-201ENST00000294728 PDIA3P30101 505 aaKnown RBP7.18□□□□□ -1.26
VCAM1-201ENST00000294728 TFCP2Q12800 502 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 TRIM28Q13263 835 aaKnown RBP7.18□□□□□ -1.26
VCAM1-201ENST00000294728 ATP2B3Q16720 1220 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 CCDC93Q567U6 631 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 STOX1Q6ZVD7 989 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 ATG9AQ7Z3C6 839 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 XAGE3Q8WTP9 111 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 SRRTQ9BXP5 876 aaKnown RBP7.18□□□□□ -1.26
VCAM1-201ENST00000294728 PTPDC1A2A3K4 754 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 RNF113AO15541 343 aaKnown RBP7.18□□□□□ -1.26
VCAM1-201ENST00000294728 JAK2O60674 1132 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 PPP6R2O75170 966 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 IL2RBP14784 551 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 HSPA6P17066 643 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 CCDC144BQ3MJ40 725 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 COPS6Q7L5N1 327 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 CCDC144CPQ8IYA2 1237 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 LINC00301Q8NCQ3 95 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 CCDC191Q8NCU4 936 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 NLGN2Q8NFZ4 835 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 MTA3Q9BTC8 594 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 PAG1Q9NWQ8 432 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 TUBE1Q9UJT0 475 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 TAF6LQ9Y6J9 622 aa7.18□□□□□ -1.26
VCAM1-201ENST00000294728 PHLPP2Q6ZVD8 1323 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 ZBTB7CA1YPR0 619 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 E7EWF7 191 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 ANXA1P04083 346 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 CSB-PGBD3P0DP91 1061 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 TATP17735 454 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 CMA1P23946 247 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 PTPN14Q15678 1187 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 CAMK4Q16566 473 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 FERMT3Q86UX7 667 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 CKAP2LQ8IYA6 745 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 C17orf53Q8N3J3 647 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 SPC24Q8NBT2 197 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 KIF18AQ8NI77 898 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 LARP6Q9BRS8 491 aaKnown RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 KIAA1468Q9P260 1216 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 TAF1LQ8IZX4 1826 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 HSPD1P10809 573 aaKnown RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 NLRP12P59046 1061 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 TPM4P67936 248 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 NKX1-1Q15270 411 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 TMED8Q6PL24 325 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 ACSBG1Q96GR2 724 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 TMX1Q9H3N1 280 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 GOLPH3LQ9H4A5 285 aa7.17□□□□□ -1.26
VCAM1-201ENST00000294728 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 TFIP11Q9UBB9 837 aaKnown RBP7.17□□□□□ -1.26
VCAM1-201ENST00000294728 NRDCO43847 1150 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 TPM1P09493 284 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 RCAN1P53805 252 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 COL9A3Q14050 684 aaPredicted RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 TPD52L1Q16890 204 aaPredicted RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 C11orf57Q6ZUT1 292 aaPredicted RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 NBPF11Q86T75 865 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 FBXO18Q8NFZ0 1043 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 RAPGEF4Q8WZA2 1011 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 USP28Q96RU2 1077 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 MYD88Q99836 296 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 NRBP1Q9UHY1 535 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 BCORQ6W2J9 1755 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 STK36Q9NRP7 1315 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 SLU7O95391 586 aaKnown RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 SKILP12757 684 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 FDPSP14324 419 aaKnown RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 H2AFXP16104 143 aaPredicted RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 LRMPQ12912 555 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 DRC7Q8IY82 874 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 DBNDD2Q9BQY9 259 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 HPSEQ9Y251 543 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 LAMB2P55268 1798 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 DLEC1Q9Y238 1755 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 TOGARAM1Q9Y4F4 1720 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 MAST3O60307 1309 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 GOLGA6L9A6NEM1 432 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 CCDC69A6NI79 296 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 BECN2A8MW95 431 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 ERVV-2B6SEH9 535 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 EYA2O00167 538 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 CBFA2T2O43439 604 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 TUBB4BP68371 445 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 FAM173BQ6P4H8 233 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 MB21D2Q8IYB1 491 aaPredicted RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 MSL3Q8N5Y2 521 aaKnown RBP7.16□□□□□ -1.26
VCAM1-201ENST00000294728 PCDHA7Q9UN72 937 aa7.16□□□□□ -1.26
VCAM1-201ENST00000294728 KIAA1551Q9HCM1 1747 aa7.15□□□□□ -1.26
VCAM1-201ENST00000294728 PRAMEF22A3QJZ6 481 aa7.15□□□□□ -1.26
VCAM1-201ENST00000294728 ZNF496Q96IT1 587 aaPredicted RBP7.15□□□□□ -1.26
VCAM1-201ENST00000294728 CD2APQ9Y5K6 639 aa7.15□□□□□ -1.26
VCAM1-201ENST00000294728 KIF13BQ9NQT8 1826 aa7.15□□□□□ -1.26
VCAM1-201ENST00000294728 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.27
VCAM1-201ENST00000294728 NCAPHQ15003 741 aa7.15□□□□□ -1.27
VCAM1-201ENST00000294728 SLC39A14Q15043 492 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms