RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 INCENPQ9NQS7 918 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 HPS5Q9UPZ3 1129 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 CICQ96RK0 1608 aaPredicted RBP16.42■□□□□ 0.22
NXF1-201ENST00000294172 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 B4E1Z4 1266 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 CPLX1O14810 134 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
NXF1-201ENST00000294172 ZPR1O75312 459 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
NXF1-201ENST00000294172 SF3B3Q15393 1217 aaKnown RBP16.42■□□□□ 0.22
NXF1-201ENST00000294172 CAMK4Q16566 473 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 CCDC24Q8N4L8 307 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 CCNL1Q9UK58 526 aaPredicted RBP16.42■□□□□ 0.22
NXF1-201ENST00000294172 CFAP45Q9UL16 551 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 COL4A1P02462 1669 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 PRKAB2O43741 272 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
NXF1-201ENST00000294172 ARAP2Q8WZ64 1704 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
NXF1-201ENST00000294172 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 CELF1Q92879 486 aaKnown RBP16.41■□□□□ 0.22
NXF1-201ENST00000294172 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 BSDC1Q9NW68 430 aaPredicted RBP16.41■□□□□ 0.22
NXF1-201ENST00000294172 DACT1Q9NYF0 836 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 NARFQ9UHQ1 456 aa16.41■□□□□ 0.22
NXF1-201ENST00000294172 CTDSPL2Q05D32 466 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 OTUD7BQ6GQQ9 843 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 LCORLQ8N3X6 602 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 FTOQ9C0B1 505 aaKnown RBP eCLIP16.4■□□□□ 0.22
NXF1-201ENST00000294172 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
NXF1-201ENST00000294172 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 SLC4A4Q9Y6R1 1079 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 NEDD4P46934 1319 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 TDO2P48775 406 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
NXF1-201ENST00000294172 GNL3LQ9NVN8 582 aaKnown RBP16.4■□□□□ 0.22
NXF1-201ENST00000294172 RXRAP19793 462 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 ALX1Q15699 326 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
NXF1-201ENST00000294172 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 RAI14Q9P0K7 980 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
NXF1-201ENST00000294172 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
NXF1-201ENST00000294172 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 CYP7A1P22680 504 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
NXF1-201ENST00000294172 CAVIN4Q5BKX8 364 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 MEX3CQ5U5Q3 659 aaKnown RBP16.39■□□□□ 0.21
NXF1-201ENST00000294172 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
NXF1-201ENST00000294172 LAMB2P55268 1798 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
NXF1-201ENST00000294172 UBE4AQ14139 1066 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 TAF1P21675 1872 aa16.38■□□□□ 0.21
NXF1-201ENST00000294172 NPHP1O15259 732 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
NXF1-201ENST00000294172 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 SLC10A5Q5PT55 438 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 CKAP2LQ8IYA6 745 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 FUCA2Q9BTY2 467 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 TNMDQ9H2S6 317 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 KDM4AO75164 1064 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 NR1I2O75469 434 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 GNAT2P19087 354 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 RRP12Q5JTH9 1297 aaKnown RBP16.37■□□□□ 0.21
NXF1-201ENST00000294172 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
NXF1-201ENST00000294172 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
NXF1-201ENST00000294172 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
NXF1-201ENST00000294172 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
NXF1-201ENST00000294172 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 ILDR1Q86SU0 546 aaPredicted RBP16.36■□□□□ 0.21
NXF1-201ENST00000294172 ZSCAN30Q86W11 494 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 ZNF804BA4D1E1 1349 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 ZMYM6O95789 1325 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 SPATA31A6Q5VVP1 1343 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms