RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ITFG2Q969R8 447 aa8.9□□□□□ -0.98
TRIM42-201ENST00000286349 ATP6V1DQ9Y5K8 247 aa8.9□□□□□ -0.98
TRIM42-201ENST00000286349 A0A1B0GUL7 405 aa8.9□□□□□ -0.99
TRIM42-201ENST00000286349 TAF5LO75529 589 aa8.9□□□□□ -0.99
TRIM42-201ENST00000286349 ZFYP08048 801 aaPredicted RBP8.9□□□□□ -0.99
TRIM42-201ENST00000286349 SLC10A5Q5PT55 438 aa8.9□□□□□ -0.99
TRIM42-201ENST00000286349 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.99
TRIM42-201ENST00000286349 BLOC1S2Q6QNY1 142 aa8.9□□□□□ -0.99
TRIM42-201ENST00000286349 SDR16C5Q8N3Y7 309 aa8.9□□□□□ -0.99
TRIM42-201ENST00000286349 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.99
TRIM42-201ENST00000286349 ZBTB12Q9Y330 459 aaPredicted RBP8.9□□□□□ -0.99
TRIM42-201ENST00000286349 DDX49Q9Y6V7 483 aaKnown RBP8.9□□□□□ -0.99
TRIM42-201ENST00000286349 CARMIL3Q8ND23 1372 aa8.9□□□□□ -0.99
TRIM42-201ENST00000286349 ANKRD18BA2A2Z9 1011 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 PDE8AO60658 829 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 MBD3O95983 291 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 IFIT1P09914 478 aaKnown RBP8.89□□□□□ -0.99
TRIM42-201ENST00000286349 CTSWP56202 376 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 CT47A1Q5JQC4 288 aaPredicted RBP8.89□□□□□ -0.99
TRIM42-201ENST00000286349 NCAPGQ9BPX3 1015 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 DSCC1Q9BVC3 393 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 PANK2Q9BZ23 570 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 SMC3Q9UQE7 1217 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 ZDHHC9Q9Y397 364 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 LRRC24Q50LG9 513 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 GORABQ5T7V8 394 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 TPTE2Q6XPS3 522 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
TRIM42-201ENST00000286349 BORCS6Q96GS4 357 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 FEZ2Q9UHY8 353 aaPredicted RBP8.89□□□□□ -0.99
TRIM42-201ENST00000286349 PARP3Q9Y6F1 533 aa8.89□□□□□ -0.99
TRIM42-201ENST00000286349 TULP2O00295 520 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 DYNC1I1O14576 645 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 IRS4O14654 1257 aaPredicted RBP8.88□□□□□ -0.99
TRIM42-201ENST00000286349 TTC39AQ5SRH9 613 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 ZNF512BQ96KM6 892 aaPredicted RBP8.88□□□□□ -0.99
TRIM42-201ENST00000286349 FAM210AQ96ND0 272 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 GZF1Q9H116 711 aaPredicted RBP8.88□□□□□ -0.99
TRIM42-201ENST00000286349 LMBRD1Q9NUN5 540 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 FAM13BQ9NYF5 915 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 RPS6KB1P23443 525 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 TIMM10P62072 90 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 PKP1Q13835 747 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 ADCK5Q3MIX3 580 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 ZMYM1Q5SVZ6 1142 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.88□□□□□ -0.99
TRIM42-201ENST00000286349 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 TTLL11Q8NHH1 800 aa8.88□□□□□ -0.99
TRIM42-201ENST00000286349 ZNF594Q96JF6 807 aaPredicted RBP8.88□□□□□ -0.99
TRIM42-201ENST00000286349 KLRG2A4D1S0 409 aaPredicted RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 RNF113AO15541 343 aaKnown RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 KIF1CO43896 1103 aaKnown RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 ITGA6P23229 1130 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 POLD1P28340 1107 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 CSPP1Q1MSJ5 1256 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 ZSCAN25Q6NSZ9 544 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 DDX46Q7L014 1031 aaKnown RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 ZNF589Q86UQ0 364 aaPredicted RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 MSL3Q8N5Y2 521 aaKnown RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 NYXQ9GZU5 481 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 COL24A1Q17RW2 1714 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 CCDC66A2RUB6 948 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 PDCP20941 246 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 TTF1Q15361 905 aaPredicted RBP8.87□□□□□ -0.99
TRIM42-201ENST00000286349 METTL24Q5JXM2 366 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 LDHAL6AQ6ZMR3 332 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 XAGE2Q96GT9 111 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 NEK1Q96PY6 1258 aa8.87□□□□□ -0.99
TRIM42-201ENST00000286349 MROH5Q6ZUA9 1318 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 STX6O43752 255 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 OFD1O75665 1012 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 CALRP27797 417 aaKnown RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 ATP2B3Q16720 1220 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 SYAP1Q96A49 352 aaPredicted RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 EDC3Q96F86 508 aaKnown RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 PUS3Q9BZE2 481 aaKnown RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 CNNM1Q9NRU3 951 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 NUB1Q9Y5A7 615 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 MYH3P11055 1940 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 PRPF40AO75400 957 aaKnown RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 ZSCAN22P10073 491 aaPredicted RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 ZNF445P59923 1031 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 CTR9Q6PD62 1173 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 DNAJC14Q6Y2X3 702 aaPredicted RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
TRIM42-201ENST00000286349 BRIP1Q9BX63 1249 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 SPON1Q9HCB6 807 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 CTNNA3Q9UI47 895 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
TRIM42-201ENST00000286349 UQCRFS1P1P0C7P4 283 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 KCNA3P22001 575 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 SF3B3Q15393 1217 aaKnown RBP8.85□□□□□ -0.99
TRIM42-201ENST00000286349 SLC51AQ86UW1 340 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 TMEM87AQ8NBN3 555 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 PAIP2Q9BPZ3 127 aaKnown RBP8.85□□□□□ -0.99
TRIM42-201ENST00000286349 GREM2Q9H772 168 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 GRPEL1Q9HAV7 217 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 LRP5O75197 1615 aa8.85□□□□□ -0.99
TRIM42-201ENST00000286349 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms