RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.9■□□□□ 0.14
ACER3-201ENST00000278544 HELLSQ9NRZ9 838 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 AKAP11Q9UKA4 1901 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 ANKRD31Q8N7Z5 1873 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 FOXP2O15409 715 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 ST18O60284 1047 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 CTDSPL2Q05D32 466 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 NLGN2Q8NFZ4 835 aa15.89■□□□□ 0.13
ACER3-201ENST00000278544 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
ACER3-201ENST00000278544 KDM4AO75164 1064 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 TDO2P48775 406 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 LDHBP07195 334 aaKnown RBP15.88■□□□□ 0.13
ACER3-201ENST00000278544 LRRFIP1Q32MZ4 808 aaKnown RBP15.88■□□□□ 0.13
ACER3-201ENST00000278544 FOXD4L6Q3SYB3 417 aaPredicted RBP15.88■□□□□ 0.13
ACER3-201ENST00000278544 ZSCAN25Q6NSZ9 544 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 FOXD4L3Q6VB84 417 aaPredicted RBP15.88■□□□□ 0.13
ACER3-201ENST00000278544 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
ACER3-201ENST00000278544 NKX2-3Q8TAU0 364 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 TCRBV5S4A2TA0A5A2 114 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 PCDHAC2Q9Y5I4 1007 aa15.88■□□□□ 0.13
ACER3-201ENST00000278544 LRP5O75197 1615 aa15.87■□□□□ 0.13
ACER3-201ENST00000278544 PPIP5K2O43314 1243 aa15.87■□□□□ 0.13
ACER3-201ENST00000278544 ZFYP08048 801 aaPredicted RBP15.87■□□□□ 0.13
ACER3-201ENST00000278544 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
ACER3-201ENST00000278544 PRDM1O75626 825 aa15.87■□□□□ 0.13
ACER3-201ENST00000278544 MAGEB6P1A0A0J9YX57 407 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 K7ELQ4 463 aaPredicted RBP15.86■□□□□ 0.13
ACER3-201ENST00000278544 RAD17O75943 681 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 AK2P54819 239 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 RNF20Q5VTR2 975 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 SLX4Q8IY92 1834 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
ACER3-201ENST00000278544 STRBPQ96SI9 672 aaKnown RBP15.86■□□□□ 0.13
ACER3-201ENST00000278544 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.13
ACER3-201ENST00000278544 TPRNQ4KMQ1 711 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 TDRD7Q8NHU6 1098 aaKnown RBP15.86■□□□□ 0.13
ACER3-201ENST00000278544 NSUN4Q96CB9 384 aaKnown RBP15.86■□□□□ 0.13
ACER3-201ENST00000278544 NAPBQ9H115 298 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 SCAF8Q9UPN6 1271 aaKnown RBP15.86■□□□□ 0.13
ACER3-201ENST00000278544 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
ACER3-201ENST00000278544 KCNA3P22001 575 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 EPB41L4AQ9HCS5 686 aaPredicted RBP15.85■□□□□ 0.13
ACER3-201ENST00000278544 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 LARGE1O95461 756 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 UBE3CQ15386 1083 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 SLC16A10Q8TF71 515 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 ZKSCAN3Q9BRR0 538 aa15.85■□□□□ 0.13
ACER3-201ENST00000278544 SAP30BPQ9UHR5 308 aaKnown RBP15.85■□□□□ 0.13
ACER3-201ENST00000278544 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
ACER3-201ENST00000278544 ZNF213O14771 459 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 CACNB3P54284 484 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 SLURP2P0DP57 97 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 FOSBP53539 338 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 PICALMQ13492 652 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 TMX3Q96JJ7 454 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 ZBTB12Q9Y330 459 aaPredicted RBP15.84■□□□□ 0.13
ACER3-201ENST00000278544 CYP2D6P10635 497 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 STYK1Q6J9G0 422 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 IFNL3Q8IZI9 196 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 LARGE2Q8N3Y3 721 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 CERS5Q8N5B7 392 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 NEK1Q96PY6 1258 aa15.84■□□□□ 0.13
ACER3-201ENST00000278544 IRS2Q9Y4H2 1338 aa15.83■□□□□ 0.13
ACER3-201ENST00000278544 E7EWF7 191 aa15.83■□□□□ 0.12
ACER3-201ENST00000278544 TTF2Q9UNY4 1162 aaKnown RBP15.83■□□□□ 0.12
ACER3-201ENST00000278544 COL11A2P13942 1736 aaPredicted RBP15.83■□□□□ 0.12
ACER3-201ENST00000278544 ECE2O60344 883 aa15.83■□□□□ 0.12
ACER3-201ENST00000278544 IMMTQ16891 758 aaKnown RBP15.83■□□□□ 0.12
ACER3-201ENST00000278544 MAPKAPK5Q8IW41 473 aa15.83■□□□□ 0.12
ACER3-201ENST00000278544 CHAMP1Q96JM3 812 aa15.83■□□□□ 0.12
ACER3-201ENST00000278544 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
ACER3-201ENST00000278544 GSG1L2A8MUP6 293 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 PODXL2Q9NZ53 605 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 B4E1Z4 1266 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 RXRAP19793 462 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 RUFY3Q7L099 469 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 TBC1D10CQ8IV04 446 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 CCDC83Q8IWF9 413 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 WDR66Q8TBY9 1149 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 SH3RF3Q8TEJ3 882 aaPredicted RBP15.82■□□□□ 0.12
ACER3-201ENST00000278544 TGFBRAP1Q8WUH2 860 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 BRF1Q92994 677 aa15.82■□□□□ 0.12
ACER3-201ENST00000278544 PKP1Q13835 747 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 DSCC1Q9BVC3 393 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 MYH13Q9UKX3 1938 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
ACER3-201ENST00000278544 USP5P45974 858 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 CCT2P78371 535 aaKnown RBP15.81■□□□□ 0.12
ACER3-201ENST00000278544 Q6ZUG5 572 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 USP17L12C9JPN9 530 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 USP17L21D6R901 530 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 USP17L8P0C7I0 530 aa15.81■□□□□ 0.12
ACER3-201ENST00000278544 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms