RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 AOPEPQ8N6M6 819 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 ERO1AQ96HE7 468 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 NSD2O96028 1365 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 SPATS2LQ9NUQ6 558 aaKnown RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 OPHN1O60890 802 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
SRRM4-201ENST00000267260 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
SRRM4-201ENST00000267260 CA8P35219 290 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 KRT2P35908 639 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 LGSNQ5TDP6 509 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 TBC1D32Q96NH3 1257 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 VAT1LQ9HCJ6 419 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 VSIG1Q86XK7 387 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 KIFC2Q96AC6 838 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 ARID5AQ03989 594 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 SPATS2Q86XZ4 545 aaKnown RBP13.54□□□□□ -0.24
SRRM4-201ENST00000267260 RLBP1P12271 317 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 UAP1Q16222 522 aaPredicted RBP13.54□□□□□ -0.24
SRRM4-201ENST00000267260 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
SRRM4-201ENST00000267260 HSP90AA5PQ58FG0 334 aa13.54□□□□□ -0.24
SRRM4-201ENST00000267260 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
SRRM4-201ENST00000267260 TRMT112Q9UI30 125 aaKnown RBP13.54□□□□□ -0.24
SRRM4-201ENST00000267260 TPX2Q9ULW0 747 aaKnown RBP13.54□□□□□ -0.24
SRRM4-201ENST00000267260 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 GNAT2P19087 354 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 DBN1Q16643 649 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
SRRM4-201ENST00000267260 MORC4Q8TE76 937 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
SRRM4-201ENST00000267260 TYRO3Q06418 890 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
SRRM4-201ENST00000267260 LZTFL1Q9NQ48 299 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 GJC1P36383 396 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 BRAPQ7Z569 592 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 STX10O60499 249 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
SRRM4-201ENST00000267260 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
SRRM4-201ENST00000267260 AKR1B15C9JRZ8 316 aaPredicted RBP13.52□□□□□ -0.24
SRRM4-201ENST00000267260 EVCP57679 992 aa13.52□□□□□ -0.24
SRRM4-201ENST00000267260 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.24
SRRM4-201ENST00000267260 GNA11P29992 359 aa13.52□□□□□ -0.24
SRRM4-201ENST00000267260 CABS1Q96KC9 395 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
SRRM4-201ENST00000267260 MYO10Q9HD67 2058 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
SRRM4-201ENST00000267260 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 FAM204AQ9H8W3 233 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 STX8Q9UNK0 236 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 USP48Q86UV5 1035 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 PARP2Q9UGN5 583 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
SRRM4-201ENST00000267260 SPECC1L-ADORA2AF8WAN1 911 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 NBPF4Q96M43 638 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 PANK2Q9BZ23 570 aa13.52□□□□□ -0.25
SRRM4-201ENST00000267260 PPANQ9NQ55 473 aaKnown RBP13.52□□□□□ -0.25
SRRM4-201ENST00000267260 WDR44Q5JSH3 913 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 GOLGA6BA6NDN3 693 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 ST5P78524 1137 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 C8orf74Q6P047 294 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 BAG1Q99933 345 aaPredicted RBP13.51□□□□□ -0.25
SRRM4-201ENST00000267260 MYH10P35580 1976 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 LRRC43Q8N309 656 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 NAP1L4Q99733 375 aaKnown RBP13.51□□□□□ -0.25
SRRM4-201ENST00000267260 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 TAF12Q16514 161 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
SRRM4-201ENST00000267260 CYP26C1Q6V0L0 522 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 NUP58Q9BVL2 599 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 HIP1RO75146 1068 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 NAPAP54920 295 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 TRIM68Q6AZZ1 485 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 SYT10Q6XYQ8 523 aa13.51□□□□□ -0.25
SRRM4-201ENST00000267260 CCDC152Q4G0S7 254 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 CCDC122Q5T0U0 273 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 CCDC89Q8N998 374 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 TSKSQ9UJT2 592 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 NAPGQ99747 312 aaPredicted RBP13.5□□□□□ -0.25
SRRM4-201ENST00000267260 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms