RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
NID1-201ENST00000264187 PDE1AP54750 535 aa16.96■□□□□ 0.31
NID1-201ENST00000264187 EVCP57679 992 aa16.96■□□□□ 0.31
NID1-201ENST00000264187 GBP7Q8N8V2 638 aaPredicted RBP16.96■□□□□ 0.31
NID1-201ENST00000264187 HDXQ7Z353 690 aa16.96■□□□□ 0.31
NID1-201ENST00000264187 CTNND2Q9UQB3 1225 aa16.96■□□□□ 0.31
NID1-201ENST00000264187 SNRPA1P09661 255 aaKnown RBP16.96■□□□□ 0.31
NID1-201ENST00000264187 ARHGEF2Q92974 986 aaKnown RBP16.96■□□□□ 0.31
NID1-201ENST00000264187 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.31
NID1-201ENST00000264187 NUCB1Q02818 461 aa16.96■□□□□ 0.3
NID1-201ENST00000264187 VWA3AA6NCI4 1184 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 TRAF5O00463 557 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 ZNF174Q15697 407 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
NID1-201ENST00000264187 KIF21BO75037 1637 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 CHMP2AO43633 222 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 GAS8O95995 478 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 LONRF3Q496Y0 759 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 CCDC117Q8IWD4 279 aaPredicted RBP16.95■□□□□ 0.3
NID1-201ENST00000264187 A0A1B0GVL5 298 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 CASQ2O14958 399 aaPredicted RBP16.95■□□□□ 0.3
NID1-201ENST00000264187 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
NID1-201ENST00000264187 VPS16Q9H269 839 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 TXNDC9O14530 226 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 RASSF4Q9H2L5 321 aa16.95■□□□□ 0.3
NID1-201ENST00000264187 BAG1Q99933 345 aaPredicted RBP16.94■□□□□ 0.3
NID1-201ENST00000264187 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
NID1-201ENST00000264187 RIMBP2O15034 1052 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 JAKMIP2Q96AA8 810 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
NID1-201ENST00000264187 AK2P54819 239 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 MAGEB6Q8N7X4 407 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
NID1-201ENST00000264187 SETDB2Q96T68 719 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 PAG1Q9NWQ8 432 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 AFG3L2Q9Y4W6 797 aa16.94■□□□□ 0.3
NID1-201ENST00000264187 NDUFAB1O14561 156 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 BUB1BO60566 1050 aaPredicted RBP16.93■□□□□ 0.3
NID1-201ENST00000264187 CCDC26Q8TAB7 109 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 NUF2Q9BZD4 464 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 FYB2Q5VWT5 728 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 AFAP1L1Q8TED9 768 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 NOC4LQ9BVI4 516 aaKnown RBP16.93■□□□□ 0.3
NID1-201ENST00000264187 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 GPR161Q8N6U8 529 aaKnown RBP16.93■□□□□ 0.3
NID1-201ENST00000264187 PSMB7Q99436 277 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 PLEKHA4Q9H4M7 779 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 LETM2Q2VYF4 491 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 FNBP1Q96RU3 617 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 VCX3BQ9H321 246 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 ANKRD24Q8TF21 1146 aa16.93■□□□□ 0.3
NID1-201ENST00000264187 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
NID1-201ENST00000264187 CPSF2Q9P2I0 782 aaKnown RBP16.92■□□□□ 0.3
NID1-201ENST00000264187 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 DAPK3O43293 454 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 TNFAIP3P21580 790 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 CLNS1AP54105 237 aaKnown RBP16.92■□□□□ 0.3
NID1-201ENST00000264187 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 CASKIN1Q8WXD9 1431 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 GABPAQ06546 454 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 TRAF1Q13077 416 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 MAEAQ7L5Y9 396 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 MCUR1Q96AQ8 359 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 STX10O60499 249 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 CALML3P27482 149 aa16.92■□□□□ 0.3
NID1-201ENST00000264187 CCDC169A6NNP5 214 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 C8orf74Q6P047 294 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 PNMA8AQ86V59 439 aaPredicted RBP16.91■□□□□ 0.3
NID1-201ENST00000264187 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.33e-6■■■■■ 33.7
NID1-201ENST00000264187 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 IFT74Q96LB3 600 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 SARNPP82979 210 aaKnown RBP16.91■□□□□ 0.3
NID1-201ENST00000264187 ERCC6LQ2NKX8 1250 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 TRIM6Q9C030 488 aaPredicted RBP16.91■□□□□ 0.3
NID1-201ENST00000264187 USTQ9Y2C2 406 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 ITIH3Q06033 890 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 GTPBP4Q9BZE4 634 aaKnown RBP16.91■□□□□ 0.3
NID1-201ENST00000264187 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
NID1-201ENST00000264187 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
NID1-201ENST00000264187 CPA1P15085 419 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 LMNTD2Q8IXW0 634 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 TBC1D31Q96DN5 1066 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 TSGA10Q9BZW7 698 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 VSIG1Q86XK7 387 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
NID1-201ENST00000264187 IQUBQ8NA54 791 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms