RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 POLR3GO15318 223 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-201ENST00000263856 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 NCOA7Q8NI08 942 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 XAGE2Q96GT9 111 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 MROH7-TTC4A0A0A0MT08 1334 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 UBE2Q2LH0YL09 131 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 WDHD1O75717 1129 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-201ENST00000263856 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
CHMP3-201ENST00000263856 INCENPQ9NQS7 918 aa14.34□□□□□ -0.11
CHMP3-201ENST00000263856 RRP12Q5JTH9 1297 aaKnown RBP14.33□□□□□ -0.12
CHMP3-201ENST00000263856 CCDC150Q8NCX0 1101 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 A0A0G2JS52 829 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 GPAA1O43292 621 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 CDK11BP21127 795 aaKnown RBP14.33□□□□□ -0.12
CHMP3-201ENST00000263856 GPTP24298 496 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 NLRP12P59046 1061 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 SYCP1Q15431 976 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 DCAF5Q96JK2 942 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 LAMA4Q16363 1823 aa14.33□□□□□ -0.12
CHMP3-201ENST00000263856 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 METAP2P50579 478 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHMP3-201ENST00000263856 UBXN4Q92575 508 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 C5P01031 1676 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 KIF13AQ9H1H9 1805 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 B4E1Z4 1266 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 SYNE4Q8N205 404 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 ZSWIM4Q9H7M6 989 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 PALLDQ8WX93 1383 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
CHMP3-201ENST00000263856 CASP7P55210 303 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
CHMP3-201ENST00000263856 TRIM29Q14134 588 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 OLFM4Q6UX06 510 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 VPS37DQ86XT2 251 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 SENP2Q9HC62 589 aa14.32□□□□□ -0.12
CHMP3-201ENST00000263856 ZBTB22O15209 634 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-201ENST00000263856 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 CREBRFQ8IUR6 639 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 CNNM3Q8NE01 707 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 MEGF6O75095 1541 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 FOXN1O15353 648 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 SEC31AO94979 1220 aaKnown RBP14.31□□□□□ -0.12
CHMP3-201ENST00000263856 ANTXR2P58335 489 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
CHMP3-201ENST00000263856 CARD6Q9BX69 1037 aa14.31□□□□□ -0.12
CHMP3-201ENST00000263856 MORC2Q9Y6X9 1032 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-201ENST00000263856 YEATS4O95619 227 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
CHMP3-201ENST00000263856 FANCLQ9NW38 375 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 HPS5Q9UPZ3 1129 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 A0A1W2PQ27 194 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 A0A1W2PQ64 194 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 A0A1W2PQD8 194 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 H7C1W4 665 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 SLFN14P0C7P3 912 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 CLCN6P51797 869 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 TEX35Q5T0J7 233 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 SLC9C2Q5TAH2 1124 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 KRT40Q6A162 431 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 OSBPL5Q9H0X9 879 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-201ENST00000263856 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 IMPACTQ9P2X3 320 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.3□□□□□ -0.125e-7■□□□□ 8.3
CHMP3-201ENST00000263856 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-201ENST00000263856 AGXT2Q9BYV1 514 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 ZNF446Q9NWS9 450 aa14.3□□□□□ -0.12
CHMP3-201ENST00000263856 GABPB1Q06547 395 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-201ENST00000263856 TERF2Q15554 542 aa14.29□□□□□ -0.12
CHMP3-201ENST00000263856 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
CHMP3-201ENST00000263856 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
CHMP3-201ENST00000263856 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
CHMP3-201ENST00000263856 NCAPHQ15003 741 aa14.29□□□□□ -0.12
CHMP3-201ENST00000263856 KARSQ15046 597 aaKnown RBP14.29□□□□□ -0.12
CHMP3-201ENST00000263856 CPLX2Q6PUV4 134 aaKnown RBP14.29□□□□□ -0.12
CHMP3-201ENST00000263856 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
CHMP3-201ENST00000263856 HELBQ8NG08 1087 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-201ENST00000263856 ADKP55263 362 aaKnown RBP14.28□□□□□ -0.12
CHMP3-201ENST00000263856 MYL5Q02045 173 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 MB21D2Q8IYB1 491 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-201ENST00000263856 GRAMD1CQ8IYS0 662 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 CPLX3Q8WVH0 158 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 CCDC34Q96HJ3 373 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 RFX7Q2KHR2 1363 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 GNG11P61952 73 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
CHMP3-201ENST00000263856 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-201ENST00000263856 KLHL10Q6JEL2 608 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 CYB5R4Q7L1T6 521 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms