RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 IFNKQ9P0W0 207 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCARF1-201ENST00000263071 ELP1O95163 1332 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 IRAK4Q9NWZ3 460 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 AP1ARQ63HQ0 302 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 PSMD1Q99460 953 aa16.25■□□□□ 0.19
SCARF1-201ENST00000263071 PAIP2Q9BPZ3 127 aaKnown RBP16.25■□□□□ 0.19
SCARF1-201ENST00000263071 KLHL33A6NCF5 533 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 NEMFO60524 1076 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 FMNL3Q8IVF7 1028 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 GCKRQ14397 625 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 PI16Q6UXB8 463 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
SCARF1-201ENST00000263071 ALDH1L1O75891 902 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 IBSPP21815 317 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-201ENST00000263071 NF2P35240 595 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 LIG3P49916 1009 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 MCMDC2Q4G0Z9 681 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 CPSF2Q9P2I0 782 aaKnown RBP16.23■□□□□ 0.19
SCARF1-201ENST00000263071 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-201ENST00000263071 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
SCARF1-201ENST00000263071 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
SCARF1-201ENST00000263071 LRRC8AQ8IWT6 810 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-201ENST00000263071 PLEKHA4Q9H4M7 779 aa16.23■□□□□ 0.19
SCARF1-201ENST00000263071 STX1AQ16623 288 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 ZNF790Q6PG37 636 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 OTUD6BQ8N6M0 293 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 MIEF2Q96C03 454 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 FAM107BQ9H098 131 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 GNL3LQ9NVN8 582 aaKnown RBP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 ERBB3P21860 1342 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 GOLGA8BA8MQT2 603 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 SERPINC1P01008 464 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 IRX1P78414 480 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 DPCR1Q3MIW9 517 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 ITFG2Q969R8 447 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 KDRP35968 1356 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 ECM2O94769 699 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-201ENST00000263071 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 PIK3R5Q8WYR1 880 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
SCARF1-201ENST00000263071 RESTQ13127 1097 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 JAKMIP3Q5VZ66 844 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 CLIC4Q9Y696 253 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 SASH3O75995 380 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 IPO7O95373 1038 aaKnown RBP16.21■□□□□ 0.19
SCARF1-201ENST00000263071 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 PAX7P23759 505 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 HNRNPH1P31943 449 aaKnown RBP16.21■□□□□ 0.19
SCARF1-201ENST00000263071 KRT32Q14532 448 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 CFAP100Q494V2 611 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 N4BP2L2Q92802 583 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-201ENST00000263071 C8orf76Q96K31 380 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 PUS3Q9BZE2 481 aaKnown RBP16.21■□□□□ 0.19
SCARF1-201ENST00000263071 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
SCARF1-201ENST00000263071 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-201ENST00000263071 NDUFA8P51970 172 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
SCARF1-201ENST00000263071 NEDD9Q14511 834 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 RALYLQ86SE5 291 aaKnown RBP16.2■□□□□ 0.18
SCARF1-201ENST00000263071 ANKRD26Q9UPS8 1709 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 USP31Q70CQ4 1352 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 CAND2O75155 1236 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 MCM6Q14566 821 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 MICU3Q86XE3 530 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 SRRTQ9BXP5 876 aaKnown RBP16.2■□□□□ 0.18
SCARF1-201ENST00000263071 DNAI1Q9UI46 699 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-201ENST00000263071 ELF1P32519 619 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 CABP4P57796 275 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
SCARF1-201ENST00000263071 ANO10Q9NW15 660 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 PAG1Q9NWQ8 432 aa16.2■□□□□ 0.18
SCARF1-201ENST00000263071 NRDCO43847 1150 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 DHX8Q14562 1220 aaKnown RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 HSP90B2PQ58FF3 399 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 TRIM6Q9C030 488 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-201ENST00000263071 CPP00450 1065 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 A1BGP04217 495 aa16.19■□□□□ 0.18
SCARF1-201ENST00000263071 SFPQP23246 707 aaKnown RBP eCLIP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms