RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 KRT32Q14532 448 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 C16orf45Q96MC5 204 aaPredicted RBP11.08□□□□□ -0.64
SIM1-201ENST00000262901 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 IBTKQ9P2D0 1353 aaPredicted RBP11.08□□□□□ -0.64
SIM1-201ENST00000262901 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
SIM1-201ENST00000262901 OTUD6BQ8N6M0 293 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 ZNF594Q96JF6 807 aaPredicted RBP11.08□□□□□ -0.64
SIM1-201ENST00000262901 TTC12Q9H892 705 aaPredicted RBP11.08□□□□□ -0.64
SIM1-201ENST00000262901 LRRC4BQ9NT99 713 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 SERPINB2P05120 415 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 SLC5A1P13866 664 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 CEP57L1Q8IYX8 460 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 USP26Q9BXU7 913 aa11.08□□□□□ -0.64
SIM1-201ENST00000262901 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
SIM1-201ENST00000262901 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 ARGLU1Q9NWB6 273 aaPredicted RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 CARMIL3Q8ND23 1372 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 TFCP2Q12800 502 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 SCAND2PQ9GZW5 306 aaPredicted RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 TRMT1Q9NXH9 659 aaKnown RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 RABL6Q3YEC7 729 aaPredicted RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 PLA2G12BQ9BX93 195 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 GREM2Q9H772 168 aa11.07□□□□□ -0.64
SIM1-201ENST00000262901 RGS17Q9UGC6 210 aaPredicted RBP11.07□□□□□ -0.64
SIM1-201ENST00000262901 BIN1O00499 593 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 POLD1P28340 1107 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
SIM1-201ENST00000262901 HAND2P61296 217 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 NFIXQ14938 502 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 TTLL11Q8NHH1 800 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 CHAMP1Q96JM3 812 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
SIM1-201ENST00000262901 DNM1Q05193 864 aaKnown RBP11.06□□□□□ -0.64
SIM1-201ENST00000262901 GPS2Q13227 327 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 NCAPGQ9BPX3 1015 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 PPP1R1BQ9UD71 204 aaPredicted RBP11.06□□□□□ -0.64
SIM1-201ENST00000262901 CCDC96Q2M329 555 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 DEFB132Q7Z7B7 95 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 PDCL2Q8N4E4 241 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
SIM1-201ENST00000262901 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
SIM1-201ENST00000262901 FEZ2Q9UHY8 353 aaPredicted RBP11.06□□□□□ -0.64
SIM1-201ENST00000262901 FOXO4P98177 505 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 PTPN12Q05209 780 aaKnown RBP11.05□□□□□ -0.64
SIM1-201ENST00000262901 ISM2Q6H9L7 571 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 ANKIB1Q9P2G1 1089 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 EVI5LQ96CN4 794 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 TTC41PQ6P2S7 1318 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 UBN2Q6ZU65 1347 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 CIAO1O76071 339 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 ZSCAN22P10073 491 aaPredicted RBP11.05□□□□□ -0.64
SIM1-201ENST00000262901 ZNF165P49910 485 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 UBE2HP62256 183 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 SKIDA1Q1XH10 827 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
SIM1-201ENST00000262901 NOL10Q9BSC4 688 aaKnown RBP11.05□□□□□ -0.64
SIM1-201ENST00000262901 NTSR2O95665 410 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 BRF1Q92994 677 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.04□□□□□ -0.64
SIM1-201ENST00000262901 RBM8AQ9Y5S9 174 aaKnown RBP11.04□□□□□ -0.64
SIM1-201ENST00000262901 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 SIPA1L3O60292 1781 aaPredicted RBP11.04□□□□□ -0.64
SIM1-201ENST00000262901 ITGB4P16144 1822 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 MMP10P09238 476 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 XBP1P17861 261 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 RPS8P62241 208 aaKnown RBP11.04□□□□□ -0.64
SIM1-201ENST00000262901 CFAP100Q494V2 611 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 CLIP2Q9UDT6 1046 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 MROH5Q6ZUA9 1318 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 CHMLP26374 656 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
SIM1-201ENST00000262901 ANKRD2Q9GZV1 360 aa11.04□□□□□ -0.64
SIM1-201ENST00000262901 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
SIM1-201ENST00000262901 POLR3DP05423 398 aaPredicted RBP11.03□□□□□ -0.64
SIM1-201ENST00000262901 PDE6BP35913 854 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 NOP2P46087 812 aaKnown RBP11.03□□□□□ -0.64
SIM1-201ENST00000262901 AK2P54819 239 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 RBSNQ9H1K0 784 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 TRIM22Q8IYM9 498 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms