RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 DDX21Q9NR30 783 aaKnown RBP eCLIP12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 SMIM24O75264 130 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 RRS1Q15050 365 aaKnown RBP12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 JAKMIP2Q96AA8 810 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 PPFIA4O75335 1185 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 HAND2P61296 217 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 BRD3Q15059 726 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 TAOK1Q7L7X3 1001 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 CYP26C1Q6V0L0 522 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 ANKRD24Q8TF21 1146 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 PPARDQ03181 441 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 GJC1P36383 396 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 UTP11Q9Y3A2 253 aaKnown RBP12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 AK2P54819 239 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 DBN1Q16643 649 aa12.07□□□□□ -0.48
SLC6A4-201ENST00000261707 LRRD1A4D1F6 860 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 MIER3Q7Z3K6 550 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 PPP1R42Q7Z4L9 355 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 NUF2Q9BZD4 464 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 PPANQ9NQ55 473 aaKnown RBP12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 BICDL2A1A5D9 508 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 TCEANC2Q96MN5 208 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 IGSF22Q8N9C0 903 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 TNNI2P48788 182 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 ZBTB17Q13105 803 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 SLC4A8Q2Y0W8 1093 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 GSDMBQ8TAX9 411 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 MTUS1Q9ULD2 1270 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 TTC21AQ8NDW8 1320 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 GOLGA8KD6RF30 607 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 COG7P83436 770 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 SND1Q7KZF4 910 aaKnown RBP eCLIP12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 MYD88Q99836 296 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 RTEL1-TNFRSF6BF6WH68 1400 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 ARL1P40616 181 aaPredicted RBP12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 USH1CQ9Y6N9 552 aa12.06□□□□□ -0.48
SLC6A4-201ENST00000261707 SF3A3Q12874 501 aaKnown RBP eCLIP12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 SEL1L2Q5TEA6 688 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 VPS52Q8N1B4 723 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 CAPS2Q9BXY5 557 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 TTC36A6NLP5 189 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 OPHN1O60890 802 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 HIP1RO75146 1068 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 RAPGEF3O95398 923 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 PDE1AP54750 535 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 ASIC1P78348 528 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 TRIM14Q14142 442 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 KRT28Q7Z3Y7 464 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 EFCAB13Q8IY85 973 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 TBC1D31Q96DN5 1066 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 TBCAO75347 108 aaKnown RBP12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 EEF2P13639 858 aaKnown RBP12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 RPSAP08865 295 aaKnown RBP12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 PAK2Q13177 524 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 CLSTN2Q9H4D0 955 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 PLCB1Q9NQ66 1216 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 GPTP24298 496 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 FANCCQ00597 558 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 SMC1BQ8NDV3 1235 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 STAG1Q8WVM7 1258 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
SLC6A4-201ENST00000261707 NDC80O14777 642 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 BAG3O95817 575 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 LDHCP07864 332 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 PLCB3Q01970 1234 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 FAF1Q9UNN5 650 aaPredicted RBP12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 CCT6AP40227 531 aaKnown RBP12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 CROCCP2Q86T23 111 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 SMARCC2Q8TAQ2 1214 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 SH3BP5O60239 455 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 CFTRP13569 1480 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 RASSF2P50749 326 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 UAP1Q16222 522 aaPredicted RBP12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 MFSD6Q6ZSS7 791 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 ATP6V0A2Q9Y487 856 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 WHAMMQ8TF30 809 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 PICK1Q9NRD5 415 aa12.04□□□□□ -0.48
SLC6A4-201ENST00000261707 MTMR3Q13615 1198 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms