RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FBXL16Q8N461 479 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
TROAP-201ENST00000257909 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 DBNLQ9UJU6 430 aaKnown RBP13.23□□□□□ -0.29
TROAP-201ENST00000257909 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 H3BQF6 201 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 TNNI3KQ59H18 835 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 HDXQ7Z353 690 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 HAUS7Q99871 368 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 FPGT-TNNI3KV9GXZ4 949 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 ANKARQ7Z5J8 1434 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 GYS2P54840 703 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 TBX2Q13207 712 aaPredicted RBP13.22□□□□□ -0.29
TROAP-201ENST00000257909 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
TROAP-201ENST00000257909 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 ESF1Q9H501 851 aaKnown RBP13.22□□□□□ -0.29
TROAP-201ENST00000257909 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 A0A1B0GUL7 405 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 ERLIN1O75477 346 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
TROAP-201ENST00000257909 SYKP43405 635 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 PLPPR3Q6T4P5 718 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 DHX58Q96C10 678 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
TROAP-201ENST00000257909 E7EWF7 191 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 USP5P45974 858 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 TUBB2AQ13885 445 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 PROSER3Q2NL68 480 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 KBTBD3Q8NAB2 608 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 TUBB2BQ9BVA1 445 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 VPS18Q9P253 973 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 MKRN1Q9UHC7 482 aaKnown RBP13.21□□□□□ -0.29
TROAP-201ENST00000257909 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 MAGEA9P43362 315 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 CHMP4BP1P59074 171 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 ICE2Q659A1 982 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 ISM2Q6H9L7 571 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 CEP112Q8N8E3 955 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 KLHDC4Q8TBB5 520 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
TROAP-201ENST00000257909 RAB21Q9UL25 225 aa13.21□□□□□ -0.29
TROAP-201ENST00000257909 GOLGA8FQ08AF8 430 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 GOLGA8DPQ0D2H9 430 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 BEND6Q5SZJ8 279 aaPredicted RBP13.2□□□□□ -0.3
TROAP-201ENST00000257909 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
TROAP-201ENST00000257909 C19orf44Q9H6X5 657 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 FANCLQ9NW38 375 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 GTF2A1P52655 376 aaPredicted RBP13.2□□□□□ -0.3
TROAP-201ENST00000257909 SLC39A14Q15043 492 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 JMYQ8N9B5 988 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
TROAP-201ENST00000257909 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 CUTAO60888 179 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 NEXNQ0ZGT2 675 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 SPECC1LQ69YQ0 1117 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 DDX46Q7L014 1031 aaKnown RBP13.19□□□□□ -0.3
TROAP-201ENST00000257909 TC2NQ8N9U0 490 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 MSANTD4Q8NCY6 345 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 PPP6R2O75170 966 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 TFCP2Q12800 502 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 MCM6Q14566 821 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
TROAP-201ENST00000257909 PDILTQ8N807 584 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
TROAP-201ENST00000257909 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
TROAP-201ENST00000257909 FAM237AA0A1B0GTK4 181 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
TROAP-201ENST00000257909 CHGBP05060 677 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 TUBBP07437 444 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 CCDC175P0C221 793 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 ANKZF1Q9H8Y5 726 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 INTS13Q9NVM9 706 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 GEMIN8Q9NWZ8 242 aaKnown RBP13.18□□□□□ -0.3
TROAP-201ENST00000257909 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 CEBPAP49715 358 aaPredicted RBP13.18□□□□□ -0.3
TROAP-201ENST00000257909 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
TROAP-201ENST00000257909 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 ACBD3Q9H3P7 528 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 L1RE1Q9UN81 338 aa13.18□□□□□ -0.3
TROAP-201ENST00000257909 OVOS2A0A0G2JMS6 1433 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms