RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CADPS2Q86UW7 1296 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 CCDC170Q8IYT3 715 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 MED4Q9NPJ6 270 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 EXOC1Q9NV70 894 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 LARSQ9P2J5 1176 aaKnown RBP14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 A0A087WUV0 522 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 SPTLC2O15270 562 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZWINTO95229 277 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 SNCBQ16143 134 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 MUM1Q2TAK8 710 aa14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 LRRC23Q53EV4 343 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA3-201ENST00000253812 E7EVH7 732 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 IFIT3O14879 490 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZKSCAN8Q15776 578 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 IQCA1Q86XH1 822 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ANKRD24Q8TF21 1146 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 VCX3AQ9NNX9 186 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 PPIP5K1Q6PFW1 1433 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZGPATQ8N5A5 531 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 TBC1D5Q92609 795 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 NUF2Q9BZD4 464 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 TPX2Q9ULW0 747 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 PCDHB15Q9Y5E8 787 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ASXL1Q8IXJ9 1541 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 PARD3Q8TEW0 1356 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ATP8B1O43520 1251 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 GKAP1Q5VSY0 366 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 STAG1Q8WVM7 1258 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 BRF1Q92994 677 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 RNF41Q9H4P4 317 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZNF215Q9UL58 517 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 NCKAP5LQ9HCH0 1330 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 PPP1R7Q15435 360 aa14.81□□□□□ -0.04
PCDHGA3-201ENST00000253812 USP5P45974 858 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 CCDC63Q8NA47 563 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 MMRN2Q9H8L6 949 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 TMOD3Q9NYL9 352 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 UBAP1LF5GYI3 381 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 GNGT1P63211 74 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 VPS52Q8N1B4 723 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 STARD3NLO95772 234 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 AFMP43652 599 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 PAK2Q13177 524 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 STXBP4Q6ZWJ1 553 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 CCDC25Q86WR0 208 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 RPGRIP1Q96KN7 1286 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 DNAI2Q9GZS0 605 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 LRP2BPQ9P2M1 347 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 IFIT1P09914 478 aaKnown RBP14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 CCDC62Q6P9F0 684 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 TAOK1Q7L7X3 1001 aa14.8□□□□□ -0.04
PCDHGA3-201ENST00000253812 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 TXNDC9O14530 226 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 PPFIA2O75334 1257 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 COG7P83436 770 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 ATL3Q6DD88 541 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 FAF1Q9UNN5 650 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 ACTN4O43707 911 aaKnown RBP14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 FLIIQ13045 1269 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 SND1Q7KZF4 910 aaKnown RBP eCLIP14.79□□□□□ -0.042e-7■■■■■ 27.3
PCDHGA3-201ENST00000253812 PER1O15534 1290 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 METAP2P50579 478 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZNF131P52739 623 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 TRIM68Q6AZZ1 485 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 ZNF287Q9HBT7 754 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 MTUS1Q9ULD2 1270 aa14.79□□□□□ -0.04
PCDHGA3-201ENST00000253812 NBPF7P0C2Y1 421 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 FAM71BQ8TC56 605 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 TARBP1Q13395 1621 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 EFCAB8A8MWE9 144 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 UBXN1Q04323 297 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 MCTP2Q6DN12 878 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 ATP2A2P16615 1042 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 STMN1P16949 149 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 TRIM14Q14142 442 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 E2F4Q16254 413 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 RAB3IPQ96QF0 476 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 MYD88Q99836 296 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 HSP90AA5PQ58FG0 334 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 BICDL1Q6ZP65 573 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 CAPS2Q9BXY5 557 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 DBF4Q9UBU7 674 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 COMMD10Q9Y6G5 202 aa14.78□□□□□ -0.04
PCDHGA3-201ENST00000253812 TTC21AQ8NDW8 1320 aa14.77□□□□□ -0.04
PCDHGA3-201ENST00000253812 SDCCAG8Q86SQ7 713 aaPredicted RBP14.77□□□□□ -0.04
PCDHGA3-201ENST00000253812 PTPRCP08575 1304 aa14.77□□□□□ -0.04
PCDHGA3-201ENST00000253812 IRX4P78413 519 aa14.77□□□□□ -0.04
PCDHGA3-201ENST00000253812 RNF40O75150 1001 aa14.77□□□□□ -0.05
PCDHGA3-201ENST00000253812 KCNA6P17658 529 aa14.77□□□□□ -0.05
PCDHGA3-201ENST00000253812 MTMR3Q13615 1198 aa14.77□□□□□ -0.05
PCDHGA3-201ENST00000253812 CATIPQ7Z7H3 387 aa14.77□□□□□ -0.05
PCDHGA3-201ENST00000253812 NGLY1Q96IV0 654 aa14.77□□□□□ -0.05
PCDHGA3-201ENST00000253812 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.05
PCDHGA3-201ENST00000253812 ANXA1P04083 346 aa14.76□□□□□ -0.05
PCDHGA3-201ENST00000253812 CFAP157Q5JU67 520 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms