RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RIC1Q4ADV7 1423 aa22■■□□□ 1.11
SNX4-201ENST00000251775 PTPDC1A2A3K4 754 aa22■■□□□ 1.11
SNX4-201ENST00000251775 NLRP10Q86W26 655 aa22■■□□□ 1.11
SNX4-201ENST00000251775 ENGASEQ8NFI3 743 aa22■■□□□ 1.11
SNX4-201ENST00000251775 L2HGDHQ9H9P8 463 aa22■■□□□ 1.11
SNX4-201ENST00000251775 NCOA5Q9HCD5 579 aaKnown RBP22■■□□□ 1.11
SNX4-201ENST00000251775 FOSBP53539 338 aa22■■□□□ 1.11
SNX4-201ENST00000251775 WASHC4Q2M389 1173 aa22■■□□□ 1.11
SNX4-201ENST00000251775 PI16Q6UXB8 463 aa22■■□□□ 1.11
SNX4-201ENST00000251775 AOPEPQ8N6M6 819 aa22■■□□□ 1.11
SNX4-201ENST00000251775 H2AFXP16104 143 aaPredicted RBP21.99■■□□□ 1.11
SNX4-201ENST00000251775 GSDMDP57764 484 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 E4F1Q66K89 784 aaPredicted RBP21.99■■□□□ 1.11
SNX4-201ENST00000251775 OSBPL5Q9H0X9 879 aaPredicted RBP21.99■■□□□ 1.11
SNX4-201ENST00000251775 CDHR2Q9BYE9 1310 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 AKAP11Q9UKA4 1901 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 NPHP1O15259 732 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 PDIA3P30101 505 aaKnown RBP21.99■■□□□ 1.11
SNX4-201ENST00000251775 HSP90AB3PQ58FF7 597 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 CCDC73Q6ZRK6 1079 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 RIPOR2Q9Y4F9 1068 aa21.99■■□□□ 1.11
SNX4-201ENST00000251775 MYH3P11055 1940 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 KINO60870 393 aaKnown RBP21.98■■□□□ 1.11
SNX4-201ENST00000251775 TTLL11Q8NHH1 800 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 GREM2Q9H772 168 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 NAP1L2Q9ULW6 460 aaPredicted RBP21.98■■□□□ 1.11
SNX4-201ENST00000251775 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 PPFIA3O75145 1194 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 ZFYP08048 801 aaPredicted RBP21.98■■□□□ 1.11
SNX4-201ENST00000251775 ERCC6LQ2NKX8 1250 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 LRRFIP1Q32MZ4 808 aaKnown RBP21.98■■□□□ 1.11
SNX4-201ENST00000251775 NAA16Q6N069 864 aaPredicted RBP21.98■■□□□ 1.11
SNX4-201ENST00000251775 CEP57L1Q8IYX8 460 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 USP28Q96RU2 1077 aa21.98■■□□□ 1.11
SNX4-201ENST00000251775 GPHNQ9NQX3 736 aaPredicted RBP21.98■■□□□ 1.11
SNX4-201ENST00000251775 LRP6O75581 1613 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 SALL1Q9NSC2 1324 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 CYP19A1P11511 503 aaPredicted RBP21.97■■□□□ 1.11
SNX4-201ENST00000251775 ITGA6P23229 1130 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 HAND2P61296 217 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 FAM160A1Q05DH4 1040 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 LRRN4CLQ8ND94 238 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 ERCC4Q92889 916 aaPredicted RBP21.97■■□□□ 1.11
SNX4-201ENST00000251775 ZNF274Q96GC6 653 aaPredicted RBP21.97■■□□□ 1.11
SNX4-201ENST00000251775 PUS7LQ9H0K6 701 aaKnown RBP21.97■■□□□ 1.11
SNX4-201ENST00000251775 FAM193AP78312 1265 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 METTL24Q5JXM2 366 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 PPP1R13BQ96KQ4 1090 aa21.97■■□□□ 1.11
SNX4-201ENST00000251775 NUP98P52948 1817 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 DISP2A7MBM2 1401 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 BCL9O00512 1426 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 ERICH4A6NGS2 130 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 FGAP02671 866 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 LDHAL6AQ6ZMR3 332 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 APPBP2Q92624 585 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 CCDC93Q567U6 631 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 IMPACTQ9P2X3 320 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 ZBTB1Q9Y2K1 713 aa21.96■■□□□ 1.11
SNX4-201ENST00000251775 MYO5AQ9Y4I1 1855 aaKnown RBP21.95■■□□□ 1.1
SNX4-201ENST00000251775 BMS1Q14692 1282 aaKnown RBP21.95■■□□□ 1.1
SNX4-201ENST00000251775 TIGD1Q96MW7 591 aa21.95■■□□□ 1.1
SNX4-201ENST00000251775 MCAMP43121 646 aa21.95■■□□□ 1.1
SNX4-201ENST00000251775 CTSWP56202 376 aa21.95■■□□□ 1.1
SNX4-201ENST00000251775 FSIP1Q8NA03 581 aa21.95■■□□□ 1.1
SNX4-201ENST00000251775 FHOD1Q9Y613 1164 aa21.95■■□□□ 1.1
SNX4-201ENST00000251775 ABCC12Q96J65 1359 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 IRX5P78411 483 aaPredicted RBP21.94■■□□□ 1.1
SNX4-201ENST00000251775 SYT10Q6XYQ8 523 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 CREBRFQ8IUR6 639 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 FBXL16Q8N461 479 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 FBXW7Q969H0 707 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
SNX4-201ENST00000251775 EVCP57679 992 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 IMMTQ16891 758 aaKnown RBP21.94■■□□□ 1.1
SNX4-201ENST00000251775 ARMCX5Q6P1M9 558 aa21.94■■□□□ 1.1
SNX4-201ENST00000251775 NAT10Q9H0A0 1025 aaKnown RBP21.94■■□□□ 1.1
SNX4-201ENST00000251775 ANKRD18BA2A2Z9 1011 aa21.93■■□□□ 1.1
SNX4-201ENST00000251775 IRS4O14654 1257 aaPredicted RBP21.93■■□□□ 1.1
SNX4-201ENST00000251775 CLCN6P51797 869 aa21.93■■□□□ 1.1
SNX4-201ENST00000251775 FDPSP14324 419 aaKnown RBP21.92■■□□□ 1.1
SNX4-201ENST00000251775 GUCY1B3Q02153 619 aa21.92■■□□□ 1.1
SNX4-201ENST00000251775 VGLL2Q8N8G2 317 aa21.92■■□□□ 1.1
SNX4-201ENST00000251775 NOL10Q9BSC4 688 aaKnown RBP21.92■■□□□ 1.1
SNX4-201ENST00000251775 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
SNX4-201ENST00000251775 PSDA5PKW4 1024 aaPredicted RBP21.92■■□□□ 1.1
SNX4-201ENST00000251775 GPAA1O43292 621 aa21.92■■□□□ 1.1
SNX4-201ENST00000251775 ME1P48163 572 aa21.92■■□□□ 1.1
SNX4-201ENST00000251775 TRMT112Q9UI30 125 aaKnown RBP21.92■■□□□ 1.1
SNX4-201ENST00000251775 ATL3Q6DD88 541 aa21.91■■□□□ 1.1
SNX4-201ENST00000251775 MB21D2Q8IYB1 491 aaPredicted RBP21.91■■□□□ 1.1
SNX4-201ENST00000251775 CCDC150Q8NCX0 1101 aa21.91■■□□□ 1.1
SNX4-201ENST00000251775 ZNF396Q96N95 335 aaPredicted RBP21.91■■□□□ 1.1
SNX4-201ENST00000251775 XPO4Q9C0E2 1151 aaKnown RBP21.91■■□□□ 1.1
SNX4-201ENST00000251775 CARMIL3Q8ND23 1372 aa21.91■■□□□ 1.1
SNX4-201ENST00000251775 DDX60Q8IY21 1712 aaKnown RBP21.91■■□□□ 1.1
SNX4-201ENST00000251775 ILDR1Q86SU0 546 aaPredicted RBP21.91■■□□□ 1.1
SNX4-201ENST00000251775 FMR1NBQ8N0W7 255 aaPredicted RBP21.91■■□□□ 1.1
SNX4-201ENST00000251775 CALCOCO1Q9P1Z2 691 aa21.91■■□□□ 1.1
SNX4-201ENST00000251775 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.91■■□□□ 1.15e-7■■■□□ 15.5
SNX4-201ENST00000251775 PRC1O43663 620 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms