RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 PCDHB15Q9Y5E8 787 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.53■□□□□ 0.08
TARDBP-201ENST00000240185 AK2P54819 239 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 ANKRD20A3Q5VUR7 823 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 PPP1R21Q6ZMI0 780 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
TARDBP-201ENST00000240185 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 SPOPO43791 374 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 PHLDB3Q6NSJ2 640 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 ESR2Q92731 530 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 BCL2L12Q9HB09 334 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 VCX3AQ9NNX9 186 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 LDHCP07864 332 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 CYP26C1Q6V0L0 522 aa15.53■□□□□ 0.08
TARDBP-201ENST00000240185 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.53■□□□□ 0.08
TARDBP-201ENST00000240185 RASSF2P50749 326 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 PAK2Q13177 524 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 RBBP5Q15291 538 aaKnown RBP15.52■□□□□ 0.08
TARDBP-201ENST00000240185 MAP3K2Q9Y2U5 619 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 BAG3O95817 575 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 DPH6Q7L8W6 267 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 IQUBQ8NA54 791 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 TMEM87AQ8NBN3 555 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.08
TARDBP-201ENST00000240185 A0A1B0GVL5 298 aa15.52■□□□□ 0.07
TARDBP-201ENST00000240185 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.07
TARDBP-201ENST00000240185 PPANQ9NQ55 473 aaKnown RBP15.52■□□□□ 0.07
TARDBP-201ENST00000240185 SPATS2LQ9NUQ6 558 aaKnown RBP15.52■□□□□ 0.07
TARDBP-201ENST00000240185 CRCPO75575 148 aa15.52■□□□□ 0.07
TARDBP-201ENST00000240185 TRIM14Q14142 442 aa15.52■□□□□ 0.07
TARDBP-201ENST00000240185 TBC1D31Q96DN5 1066 aa15.52■□□□□ 0.07
TARDBP-201ENST00000240185 HDAC9Q9UKV0 1011 aa15.52■□□□□ 0.07
TARDBP-201ENST00000240185 CC2D2AQ9P2K1 1620 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 PFDN1O60925 122 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 BRAPQ7Z569 592 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 LIG3P49916 1009 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 OPHN1O60890 802 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 MCMDC2Q4G0Z9 681 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 RASIP1Q5U651 963 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 STAG1Q8WVM7 1258 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 VPS16Q9H269 839 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 FAF1Q9UNN5 650 aaPredicted RBP15.51■□□□□ 0.07
TARDBP-201ENST00000240185 GNAQP50148 359 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 MSANTD4Q8NCY6 345 aa15.51■□□□□ 0.07
TARDBP-201ENST00000240185 SMIM24O75264 130 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 SLC8A1P32418 973 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 ZNF75DP51815 510 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 MORC4Q8TE76 937 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 NOC4LQ9BVI4 516 aaKnown RBP15.5■□□□□ 0.07
TARDBP-201ENST00000240185 MAK16Q9BXY0 300 aaKnown RBP15.5■□□□□ 0.07
TARDBP-201ENST00000240185 RNF40O75150 1001 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 NAPAP54920 295 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 ZBTB17Q13105 803 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 KRT71Q3SY84 523 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 SECISBP2LQ93073 1101 aaKnown RBP15.5■□□□□ 0.07
TARDBP-201ENST00000240185 IGF1RP08069 1367 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 PTPDC1A2A3K4 754 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 TRPC3Q13507 836 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 RASA3Q14644 834 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 UBE3BQ7Z3V4 1068 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 TRIM4Q9C037 500 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 FAM204AQ9H8W3 233 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 CABP5Q9NP86 173 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 RLBP1P12271 317 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 GNGT1P63211 74 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 CCDC65Q8IXS2 484 aa15.5■□□□□ 0.07
TARDBP-201ENST00000240185 DCAF17Q5H9S7 520 aaPredicted RBP15.49■□□□□ 0.07
TARDBP-201ENST00000240185 KLHL7Q8IXQ5 586 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 NOX5Q96PH1 765 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 ELP1O95163 1332 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 PI4KAP2A4QPH2 592 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 PPFIA2O75334 1257 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
TARDBP-201ENST00000240185 FANCCQ00597 558 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 RUFY3Q7L099 469 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 PI4KAP1Q8N8J0 262 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 CRNKL1Q9BZJ0 848 aaKnown RBP15.49■□□□□ 0.07
TARDBP-201ENST00000240185 I3L4J1 428 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 ARHGAP6O43182 974 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 TSC1Q92574 1164 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 GDAP1L1Q96MZ0 367 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 TSPY3P0CV98 308 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 TSPY8P0CW00 308 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 MTMR3Q13615 1198 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 CALML3P27482 149 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 VWA3BQ502W6 1294 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 ASIC3Q9UHC3 531 aa15.49■□□□□ 0.07
TARDBP-201ENST00000240185 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
TARDBP-201ENST00000240185 KRT15P19012 456 aa15.48■□□□□ 0.07
TARDBP-201ENST00000240185 RAB3IPQ96QF0 476 aaPredicted RBP15.48■□□□□ 0.07
TARDBP-201ENST00000240185 XAB2Q9HCS7 855 aaKnown RBP15.48■□□□□ 0.07
TARDBP-201ENST00000240185 PLIN2Q99541 437 aa15.48■□□□□ 0.07
TARDBP-201ENST00000240185 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
TARDBP-201ENST00000240185 CEP104O60308 925 aa15.48■□□□□ 0.07
TARDBP-201ENST00000240185 HLA-DOAP06340 250 aa15.48■□□□□ 0.07
TARDBP-201ENST00000240185 MPRIPQ6WCQ1 1025 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms