RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 H7C1W4 665 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 IL15P40933 162 aaPredicted RBP17.93■□□□□ 0.46
DDX55-201ENST00000238146 SLC39A14Q15043 492 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 TIGD1Q96MW7 591 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
DDX55-201ENST00000238146 TADA3O75528 432 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 LRRC24Q50LG9 513 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 TMCO3Q6UWJ1 677 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 MB21D2Q8IYB1 491 aaPredicted RBP17.93■□□□□ 0.46
DDX55-201ENST00000238146 ORAI2Q96SN7 254 aa17.93■□□□□ 0.46
DDX55-201ENST00000238146 CPLX1O14810 134 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 URI1O94763 535 aaPredicted RBP17.92■□□□□ 0.46
DDX55-201ENST00000238146 SERPINC1P01008 464 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 SYKP43405 635 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 TTC5Q8N0Z6 440 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 SRRTQ9BXP5 876 aaKnown RBP17.92■□□□□ 0.46
DDX55-201ENST00000238146 ARGLU1Q9NWB6 273 aaPredicted RBP17.92■□□□□ 0.46
DDX55-201ENST00000238146 A0A1B0GUL7 405 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 ZBTB22O15209 634 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 ANTXR2P58335 489 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 MYL5Q02045 173 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 IMMTQ16891 758 aaKnown RBP17.92■□□□□ 0.46
DDX55-201ENST00000238146 PARP3Q9Y6F1 533 aa17.92■□□□□ 0.46
DDX55-201ENST00000238146 CBFA2T2O43439 604 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 FGAP02671 866 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 GOLGA8FQ08AF8 430 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 GOLGA8DPQ0D2H9 430 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 CFAP100Q494V2 611 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 VSTM4Q8IW00 320 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 CARD6Q9BX69 1037 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 CALCOCO1Q9P1Z2 691 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 HPSEQ9Y251 543 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 EYA2O00167 538 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 ZNF594Q96JF6 807 aaPredicted RBP17.91■□□□□ 0.46
DDX55-201ENST00000238146 TMEM51Q9NW97 253 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
DDX55-201ENST00000238146 ARFGEF2Q9Y6D5 1785 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 EFCAB8A8MWE9 144 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 PTPN21Q16825 1174 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
DDX55-201ENST00000238146 SHC4Q6S5L8 630 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 TMEM94Q12767 1356 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 FKBP4Q02790 459 aaKnown RBP eCLIP17.9■□□□□ 0.46
DDX55-201ENST00000238146 PNOCQ13519 176 aa17.9■□□□□ 0.46
DDX55-201ENST00000238146 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.9■□□□□ 0.46
DDX55-201ENST00000238146 FCHSD1Q86WN1 690 aa17.89■□□□□ 0.45
DDX55-201ENST00000238146 TMEM139Q8IV31 216 aa17.89■□□□□ 0.45
DDX55-201ENST00000238146 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
DDX55-201ENST00000238146 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.45
DDX55-201ENST00000238146 VWA3AA6NCI4 1184 aa17.89■□□□□ 0.45
DDX55-201ENST00000238146 SEC31AO94979 1220 aaKnown RBP17.89■□□□□ 0.45
DDX55-201ENST00000238146 TOP1P11387 765 aaKnown RBP17.89■□□□□ 0.45
DDX55-201ENST00000238146 WASHC4Q2M389 1173 aa17.89■□□□□ 0.45
DDX55-201ENST00000238146 ZSCAN12O43309 604 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX55-201ENST00000238146 FANCLQ9NW38 375 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 NLRP2Q9NX02 1062 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 TATP17735 454 aaPredicted RBP17.88■□□□□ 0.45
DDX55-201ENST00000238146 IRX5P78411 483 aaPredicted RBP17.88■□□□□ 0.45
DDX55-201ENST00000238146 PTPAQ15257 358 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 PUS3Q9BZE2 481 aaKnown RBP17.88■□□□□ 0.45
DDX55-201ENST00000238146 INTS13Q9NVM9 706 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 PPP2R2CQ9Y2T4 447 aa17.88■□□□□ 0.45
DDX55-201ENST00000238146 FAM237AA0A1B0GTK4 181 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 ARHGAP6O43182 974 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 PPP6R2O75170 966 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 VPS37DQ86XT2 251 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 EPC1Q9H2F5 836 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 TPM1P09493 284 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
DDX55-201ENST00000238146 RALYLQ86SE5 291 aaKnown RBP17.87■□□□□ 0.45
DDX55-201ENST00000238146 METTL16Q86W50 562 aaKnown RBP17.87■□□□□ 0.45
DDX55-201ENST00000238146 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
DDX55-201ENST00000238146 FAM177A1Q8N128 213 aaPredicted RBP17.87■□□□□ 0.45
DDX55-201ENST00000238146 UBXN6Q9BZV1 441 aa17.87■□□□□ 0.45
DDX55-201ENST00000238146 CWC25Q9NXE8 425 aaPredicted RBP17.87■□□□□ 0.45
DDX55-201ENST00000238146 MPHOSPH8Q99549 860 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 ALG1Q9BT22 464 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 NBPF26B4DH59 902 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 POLR3GO15318 223 aaPredicted RBP17.86■□□□□ 0.45
DDX55-201ENST00000238146 ATP8B1O43520 1251 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 HNRNPH2P55795 449 aaKnown RBP17.86■□□□□ 0.45
DDX55-201ENST00000238146 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 RESP18Q5W5W9 173 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 NBPF10Q6P3W6 841 aaKnown RBP17.86■□□□□ 0.45
DDX55-201ENST00000238146 NBPF15Q8N660 670 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 CLIC6Q96NY7 704 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 PUS7LQ9H0K6 701 aaKnown RBP17.86■□□□□ 0.45
DDX55-201ENST00000238146 SPEF2Q9C093 1822 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
DDX55-201ENST00000238146 SASH3O75995 380 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms