RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 SMARCC2Q8TAQ2 1214 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 GRPEL1Q9HAV7 217 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 GDPD2Q9HCC8 539 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 ATP6V1DQ9Y5K8 247 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 NCLP19338 710 aaKnown RBP18.88■□□□□ 0.61
ITGA4-201ENST00000233573 APOBRQ0VD83 1088 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 MAP3K12Q12852 859 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 CAMKK2Q96RR4 588 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 TMEM63CQ9P1W3 806 aa18.88■□□□□ 0.61
ITGA4-201ENST00000233573 JAK2O60674 1132 aa18.87■□□□□ 0.61
ITGA4-201ENST00000233573 KLRK1P26718 216 aa18.87■□□□□ 0.61
ITGA4-201ENST00000233573 CDC37L1Q7L3B6 337 aa18.87■□□□□ 0.61
ITGA4-201ENST00000233573 MAGEB6Q8N7X4 407 aa18.87■□□□□ 0.61
ITGA4-201ENST00000233573 LLPHQ9BRT6 129 aaKnown RBP18.87■□□□□ 0.61
ITGA4-201ENST00000233573 RBM27Q9P2N5 1060 aaKnown RBP18.87■□□□□ 0.61
ITGA4-201ENST00000233573 IQSEC3Q9UPP2 1182 aaPredicted RBP18.87■□□□□ 0.61
ITGA4-201ENST00000233573 ZMYM6O95789 1325 aa18.87■□□□□ 0.61
ITGA4-201ENST00000233573 COL1A1P02452 1464 aaPredicted RBP18.87■□□□□ 0.61
ITGA4-201ENST00000233573 GADD45BO75293 160 aaPredicted RBP18.86■□□□□ 0.61
ITGA4-201ENST00000233573 HMGB2P26583 209 aaKnown RBP18.86■□□□□ 0.61
ITGA4-201ENST00000233573 GYG1P46976 350 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 ALX1Q15699 326 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 ZNF274Q96GC6 653 aaPredicted RBP18.86■□□□□ 0.61
ITGA4-201ENST00000233573 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
ITGA4-201ENST00000233573 ZNF213O14771 459 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 ANTXR2P58335 489 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 FGD1P98174 961 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 CHST3Q7LGC8 479 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
ITGA4-201ENST00000233573 CTDNEP1O95476 244 aa18.85■□□□□ 0.61
ITGA4-201ENST00000233573 GRAPQ13588 217 aa18.85■□□□□ 0.61
ITGA4-201ENST00000233573 GRAPLQ8TC17 118 aaPredicted RBP18.85■□□□□ 0.61
ITGA4-201ENST00000233573 ANKRD31Q8N7Z5 1873 aa18.85■□□□□ 0.61
ITGA4-201ENST00000233573 PDIA3P30101 505 aaKnown RBP18.85■□□□□ 0.61
ITGA4-201ENST00000233573 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
ITGA4-201ENST00000233573 NSUN7Q8NE18 718 aaKnown RBP18.85■□□□□ 0.61
ITGA4-201ENST00000233573 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
ITGA4-201ENST00000233573 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
ITGA4-201ENST00000233573 AIDAQ96BJ3 306 aa18.85■□□□□ 0.61
ITGA4-201ENST00000233573 DNM1Q05193 864 aaKnown RBP18.84■□□□□ 0.61
ITGA4-201ENST00000233573 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
ITGA4-201ENST00000233573 TBC1D10CQ8IV04 446 aa18.84■□□□□ 0.61
ITGA4-201ENST00000233573 NLGN1Q8N2Q7 840 aa18.84■□□□□ 0.61
ITGA4-201ENST00000233573 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
ITGA4-201ENST00000233573 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
ITGA4-201ENST00000233573 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
ITGA4-201ENST00000233573 PATL2C9JE40 543 aaKnown RBP18.83■□□□□ 0.61
ITGA4-201ENST00000233573 MMP10P09238 476 aa18.83■□□□□ 0.61
ITGA4-201ENST00000233573 MCM5P33992 734 aa18.83■□□□□ 0.61
ITGA4-201ENST00000233573 FAM84BQ96KN1 310 aaPredicted RBP18.83■□□□□ 0.61
ITGA4-201ENST00000233573 GPHNQ9NQX3 736 aaPredicted RBP18.83■□□□□ 0.61
ITGA4-201ENST00000233573 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.6
ITGA4-201ENST00000233573 CACNA1SQ13698 1873 aa18.83■□□□□ 0.6
ITGA4-201ENST00000233573 PRC1O43663 620 aa18.83■□□□□ 0.6
ITGA4-201ENST00000233573 MBD4O95243 580 aa18.83■□□□□ 0.6
ITGA4-201ENST00000233573 FLAD1Q8NFF5 587 aa18.83■□□□□ 0.6
ITGA4-201ENST00000233573 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
ITGA4-201ENST00000233573 NKX2-3Q8TAU0 364 aa18.82■□□□□ 0.6
ITGA4-201ENST00000233573 NRXN2Q9P2S2 1712 aa18.82■□□□□ 0.6
ITGA4-201ENST00000233573 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 FBXO33Q7Z6M2 555 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 IFNL3Q8IZI9 196 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 GNL3LQ9NVN8 582 aaKnown RBP18.81■□□□□ 0.6
ITGA4-201ENST00000233573 DENND2AQ9ULE3 1009 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 CHD4Q14839 1912 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 ANKRD2Q9GZV1 360 aa18.81■□□□□ 0.6
ITGA4-201ENST00000233573 APPP05067 770 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
ITGA4-201ENST00000233573 FERMT3Q86UX7 667 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 TXNRD3Q86VQ6 643 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 LCORLQ8N3X6 602 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 NCOA5Q9HCD5 579 aaKnown RBP18.8■□□□□ 0.6
ITGA4-201ENST00000233573 IRS2Q9Y4H2 1338 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 FIBPO43427 364 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 UBE2HP62256 183 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 CCT2P78371 535 aaKnown RBP18.8■□□□□ 0.6
ITGA4-201ENST00000233573 HMGN5P82970 282 aaKnown RBP18.8■□□□□ 0.6
ITGA4-201ENST00000233573 CAVIN4Q5BKX8 364 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 ADGRA1Q86SQ6 560 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 GPR101Q96P66 508 aaPredicted RBP18.8■□□□□ 0.6
ITGA4-201ENST00000233573 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 LRP2BPQ9P2M1 347 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 HPS5Q9UPZ3 1129 aa18.8■□□□□ 0.6
ITGA4-201ENST00000233573 MYH13Q9UKX3 1938 aa18.79■□□□□ 0.6
ITGA4-201ENST00000233573 GNAT2P19087 354 aa18.79■□□□□ 0.6
ITGA4-201ENST00000233573 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
ITGA4-201ENST00000233573 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
ITGA4-201ENST00000233573 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
ITGA4-201ENST00000233573 STK32BQ9NY57 414 aa18.79■□□□□ 0.6
ITGA4-201ENST00000233573 PDS5AQ29RF7 1337 aaKnown RBP18.78■□□□□ 0.6
ITGA4-201ENST00000233573 SEMA3EO15041 775 aa18.78■□□□□ 0.6
ITGA4-201ENST00000233573 ZBTB22O15209 634 aa18.78■□□□□ 0.6
ITGA4-201ENST00000233573 PRKAB2O43741 272 aa18.78■□□□□ 0.6
ITGA4-201ENST00000233573 RESTQ13127 1097 aa18.78■□□□□ 0.6
ITGA4-201ENST00000233573 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
ITGA4-201ENST00000233573 TACC3Q9Y6A5 838 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms