RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 RBM8AQ9Y5S9 174 aaKnown RBP24.14■■□□□ 1.45
SNX3-201ENST00000230085 SMTNL1A8MU46 457 aa24.13■■□□□ 1.45
SNX3-201ENST00000230085 RABL6Q3YEC7 729 aaPredicted RBP24.13■■□□□ 1.45
SNX3-201ENST00000230085 STYK1Q6J9G0 422 aa24.13■■□□□ 1.45
SNX3-201ENST00000230085 DDX46Q7L014 1031 aaKnown RBP24.13■■□□□ 1.45
SNX3-201ENST00000230085 RBM17Q96I25 401 aaKnown RBP24.13■■□□□ 1.45
SNX3-201ENST00000230085 PIM2Q9P1W9 311 aa24.13■■□□□ 1.45
SNX3-201ENST00000230085 SARM1Q6SZW1 724 aa24.12■■□□□ 1.45
SNX3-201ENST00000230085 PAXBP1Q9Y5B6 917 aa24.12■■□□□ 1.45
SNX3-201ENST00000230085 DLEC1Q9Y238 1755 aa24.12■■□□□ 1.45
SNX3-201ENST00000230085 PPP4R3BQ5MIZ7 849 aa24.11■■□□□ 1.45
SNX3-201ENST00000230085 VPS37CA5D8V6 355 aaPredicted RBP24.11■■□□□ 1.45
SNX3-201ENST00000230085 SLC27A2O14975 620 aa24.11■■□□□ 1.45
SNX3-201ENST00000230085 NEMFO60524 1076 aa24.11■■□□□ 1.45
SNX3-201ENST00000230085 ITGA6P23229 1130 aa24.11■■□□□ 1.45
SNX3-201ENST00000230085 ZNF75DP51815 510 aa24.11■■□□□ 1.45
SNX3-201ENST00000230085 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
SNX3-201ENST00000230085 CPA1P15085 419 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 RPS6KB1P23443 525 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 TTLL6Q8N841 843 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 CELF1Q92879 486 aaKnown RBP24.1■■□□□ 1.45
SNX3-201ENST00000230085 CNKSR1Q969H4 720 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 CRAMP1Q96RY5 1269 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 TNMDQ9H2S6 317 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 CBX8Q9HC52 389 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 KCND1Q9NSA2 647 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 COL4A1P02462 1669 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 CACNA1SQ13698 1873 aa24.1■■□□□ 1.45
SNX3-201ENST00000230085 IFIT2P09913 472 aaKnown RBP24.09■■□□□ 1.45
SNX3-201ENST00000230085 LIG1P18858 919 aa24.09■■□□□ 1.45
SNX3-201ENST00000230085 CDC37L1Q7L3B6 337 aa24.09■■□□□ 1.45
SNX3-201ENST00000230085 TICAM2Q86XR7 235 aa24.08■■□□□ 1.45
SNX3-201ENST00000230085 LEO1Q8WVC0 666 aaPredicted RBP24.08■■□□□ 1.45
SNX3-201ENST00000230085 SLX4Q8IY92 1834 aa24.08■■□□□ 1.45
SNX3-201ENST00000230085 PTGS1P23219 599 aa24.08■■□□□ 1.44
SNX3-201ENST00000230085 IFIT5Q13325 482 aaKnown RBP24.08■■□□□ 1.44
SNX3-201ENST00000230085 GRAPQ13588 217 aa24.08■■□□□ 1.44
SNX3-201ENST00000230085 KRT32Q14532 448 aa24.08■■□□□ 1.44
SNX3-201ENST00000230085 ATP2B3Q16720 1220 aa24.08■■□□□ 1.44
SNX3-201ENST00000230085 BLOC1S2Q6QNY1 142 aa24.08■■□□□ 1.44
SNX3-201ENST00000230085 GRAPLQ8TC17 118 aaPredicted RBP24.08■■□□□ 1.44
SNX3-201ENST00000230085 RTL9Q8NET4 1388 aa24.07■■□□□ 1.44
SNX3-201ENST00000230085 OS9Q13438 667 aaPredicted RBP24.07■■□□□ 1.44
SNX3-201ENST00000230085 CCDC57Q2TAC2 916 aa24.07■■□□□ 1.44
SNX3-201ENST00000230085 DALRD3Q5D0E6 543 aaKnown RBP24.07■■□□□ 1.44
SNX3-201ENST00000230085 BCS1LQ9Y276 419 aa24.07■■□□□ 1.44
SNX3-201ENST00000230085 SLC51AQ86UW1 340 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 MPNDQ8N594 471 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 TSC1Q92574 1164 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 ANKRD18BA2A2Z9 1011 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 CTAGE5O15320 804 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 RPS8P62241 208 aaKnown RBP24.06■■□□□ 1.44
SNX3-201ENST00000230085 ANO6Q4KMQ2 910 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 ZSCAN25Q6NSZ9 544 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 ZNF594Q96JF6 807 aaPredicted RBP24.06■■□□□ 1.44
SNX3-201ENST00000230085 SPATA32Q96LK8 384 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 ZSCAN16Q9H4T2 348 aaPredicted RBP24.06■■□□□ 1.44
SNX3-201ENST00000230085 DACT1Q9NYF0 836 aa24.06■■□□□ 1.44
SNX3-201ENST00000230085 ZNF219Q9P2Y4 722 aaPredicted RBP24.06■■□□□ 1.44
SNX3-201ENST00000230085 TOB2Q14106 344 aaPredicted RBP24.05■■□□□ 1.44
SNX3-201ENST00000230085 MRFAP1L1Q96HT8 127 aa24.05■■□□□ 1.44
SNX3-201ENST00000230085 CDC5LQ99459 802 aaKnown RBP24.05■■□□□ 1.44
SNX3-201ENST00000230085 LARP6Q9BRS8 491 aaKnown RBP24.05■■□□□ 1.44
SNX3-201ENST00000230085 OGFRQ9NZT2 677 aa24.05■■□□□ 1.44
SNX3-201ENST00000230085 BBOX1O75936 387 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 NCBP1Q09161 790 aaKnown RBP24.04■■□□□ 1.44
SNX3-201ENST00000230085 NMIQ13287 307 aaPredicted RBP24.04■■□□□ 1.44
SNX3-201ENST00000230085 ATL3Q6DD88 541 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 OLFM4Q6UX06 510 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 CCDC186Q7Z3E2 898 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 LUZP1Q86V48 1076 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 ANKRD18AQ8IVF6 992 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 KLHDC4Q8TBB5 520 aa24.04■■□□□ 1.44
SNX3-201ENST00000230085 SPC24Q8NBT2 197 aa24.03■■□□□ 1.44
SNX3-201ENST00000230085 PPEF1O14829 653 aaPredicted RBP24.03■■□□□ 1.44
SNX3-201ENST00000230085 C21orf2O43822 256 aa24.03■■□□□ 1.44
SNX3-201ENST00000230085 LLPHQ9BRT6 129 aaKnown RBP24.03■■□□□ 1.44
SNX3-201ENST00000230085 CGNQ9P2M7 1197 aaKnown RBP24.03■■□□□ 1.44
SNX3-201ENST00000230085 GOLGA6L4A6NEF3 574 aa24.02■■□□□ 1.44
SNX3-201ENST00000230085 SASH1O94885 1247 aa24.02■■□□□ 1.44
SNX3-201ENST00000230085 YBX3P16989 372 aaKnown RBP eCLIP24.02■■□□□ 1.441e-8■■□□□ 12.1
SNX3-201ENST00000230085 RFX5P48382 616 aaPredicted RBP24.02■■□□□ 1.44
SNX3-201ENST00000230085 RESTQ13127 1097 aa24.02■■□□□ 1.44
SNX3-201ENST00000230085 AACSQ86V21 672 aa24.02■■□□□ 1.44
SNX3-201ENST00000230085 C7orf43Q8WVR3 580 aa24.02■■□□□ 1.44
SNX3-201ENST00000230085 GTF3C6Q969F1 213 aa24.02■■□□□ 1.44
SNX3-201ENST00000230085 PLCB2Q00722 1185 aa24.01■■□□□ 1.43
SNX3-201ENST00000230085 TAF7LQ5H9L4 462 aa24.01■■□□□ 1.43
SNX3-201ENST00000230085 IGHMBP2P38935 993 aaKnown RBP24.01■■□□□ 1.43
SNX3-201ENST00000230085 ZNF165P49910 485 aa24.01■■□□□ 1.43
SNX3-201ENST00000230085 GABPB1Q06547 395 aaPredicted RBP24.01■■□□□ 1.43
SNX3-201ENST00000230085 CFAP45Q9UL16 551 aa24.01■■□□□ 1.43
SNX3-201ENST00000230085 SPEF2Q9C093 1822 aa24■■□□□ 1.43
SNX3-201ENST00000230085 PTPN12Q05209 780 aaKnown RBP24■■□□□ 1.43
SNX3-201ENST00000230085 IQCB1Q15051 598 aa24■■□□□ 1.43
SNX3-201ENST00000230085 PGBD1Q96JS3 809 aa24■■□□□ 1.43
SNX3-201ENST00000230085 FAM227BQ96M60 508 aa24■■□□□ 1.43
SNX3-201ENST00000230085 MPHOSPH8Q99549 860 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms