RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZBTB3Q9H5J0 574 aa15.58■□□□□ 0.08
HCFC2-201ENST00000229330 CAPN7Q9Y6W3 813 aa15.58■□□□□ 0.08
HCFC2-201ENST00000229330 PHACTR3Q96KR7 559 aa15.58■□□□□ 0.08
HCFC2-201ENST00000229330 TERF2Q15554 542 aa15.58■□□□□ 0.08
HCFC2-201ENST00000229330 TMTC1Q8IUR5 882 aa15.58■□□□□ 0.08
HCFC2-201ENST00000229330 LMBR1Q8WVP7 490 aa15.58■□□□□ 0.08
HCFC2-201ENST00000229330 TLDC2A0PJX2 215 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 ZNF202O95125 648 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 CCT6AP40227 531 aaKnown RBP15.57■□□□□ 0.08
HCFC2-201ENST00000229330 IFT74Q96LB3 600 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 TRIM35Q9UPQ4 493 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
HCFC2-201ENST00000229330 NEBLO76041 1014 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 TRMT2AQ8IZ69 625 aaKnown RBP15.57■□□□□ 0.08
HCFC2-201ENST00000229330 UBLCP1Q8WVY7 318 aaPredicted RBP15.57■□□□□ 0.08
HCFC2-201ENST00000229330 CABS1Q96KC9 395 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 DDX12PQ92771 950 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 SWAP70Q9UH65 585 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
HCFC2-201ENST00000229330 CDC25BP30305 580 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 TMTC2Q8N394 836 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 CCDC77Q9BR77 488 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 KRT23Q9C075 422 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 MKNK2Q9HBH9 465 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 NRBP1Q9UHY1 535 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 GRM8O00222 908 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 ATP11AP98196 1134 aa15.57■□□□□ 0.08
HCFC2-201ENST00000229330 LIG3P49916 1009 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 TMEM132AQ24JP5 1023 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 FAM71BQ8TC56 605 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 ZNF287Q9HBT7 754 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 NR1I2O75469 434 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 LMNTD2Q8IXW0 634 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 MLKLQ8NB16 471 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 TRMT112Q9UI30 125 aaKnown RBP15.56■□□□□ 0.08
HCFC2-201ENST00000229330 SPTY2D1Q68D10 685 aaPredicted RBP15.56■□□□□ 0.08
HCFC2-201ENST00000229330 MED4Q9NPJ6 270 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 KCNH3Q9ULD8 1083 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 SMIM23A6NLE4 172 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 ATP2B3Q16720 1220 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 NAA16Q6N069 864 aaPredicted RBP15.56■□□□□ 0.08
HCFC2-201ENST00000229330 SND1Q7KZF4 910 aaKnown RBP eCLIP15.56■□□□□ 0.08
HCFC2-201ENST00000229330 IFT20Q8IY31 132 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 MRVI1Q9Y6F6 885 aa15.56■□□□□ 0.08
HCFC2-201ENST00000229330 SSH2Q76I76 1423 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 FLT4P35916 1363 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 BICDL2A1A5D9 508 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 DTNBO60941 627 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 ACTN2P35609 894 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 SETDB1Q15047 1291 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 WHAMMP3Q1A5X7 153 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 TDRD7Q8NHU6 1098 aaKnown RBP15.55■□□□□ 0.08
HCFC2-201ENST00000229330 STAMBPO95630 424 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 SLC5A1P13866 664 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 JAKMIP2Q96AA8 810 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 ATP5J2-PTCD1G3V325 749 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 SNRPA1P09661 255 aaKnown RBP15.55■□□□□ 0.08
HCFC2-201ENST00000229330 TM6SF1Q9BZW5 370 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 CNNM2Q9H8M5 875 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 PAG1Q9NWQ8 432 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 KCNA6P17658 529 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 PRPHP41219 470 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 HNRNPH2P55795 449 aaKnown RBP15.55■□□□□ 0.08
HCFC2-201ENST00000229330 MAP3K9P80192 1104 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 MTHFSDQ2M296 383 aaKnown RBP15.55■□□□□ 0.08
HCFC2-201ENST00000229330 PDE11AQ9HCR9 933 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 PPP2R2CQ9Y2T4 447 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 VIMP08670 466 aaKnown RBP15.55■□□□□ 0.08
HCFC2-201ENST00000229330 KRT13P13646 458 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 PCK1P35558 622 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 CETN1Q12798 172 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 NFE2L3Q9Y4A8 694 aa15.55■□□□□ 0.08
HCFC2-201ENST00000229330 ATP10AO60312 1499 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 CCDC172P0C7W6 258 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 GNGT1P63211 74 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 ASIC1P78348 528 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 VPS16Q9H269 839 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 RGS12O14924 1447 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 RABGGTAQ92696 567 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 PLVAPQ9BX97 442 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 CCDC160A6NGH7 325 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 SPATS2Q86XZ4 545 aaKnown RBP15.54■□□□□ 0.08
HCFC2-201ENST00000229330 PPP1R13BQ96KQ4 1090 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 TRIM7Q9C029 511 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 USP19O94966 1318 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 SEC31AO94979 1220 aaKnown RBP15.54■□□□□ 0.08
HCFC2-201ENST00000229330 GPTP24298 496 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 SF3B2Q13435 895 aaKnown RBP15.54■□□□□ 0.08
HCFC2-201ENST00000229330 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 PALD1Q9ULE6 856 aa15.54■□□□□ 0.08
HCFC2-201ENST00000229330 ZPR1O75312 459 aa15.53■□□□□ 0.08
HCFC2-201ENST00000229330 ME3Q16798 604 aa15.53■□□□□ 0.08
HCFC2-201ENST00000229330 CEP85LQ5SZL2 805 aa15.53■□□□□ 0.08
HCFC2-201ENST00000229330 KSR2Q6VAB6 950 aa15.53■□□□□ 0.08
HCFC2-201ENST00000229330 PPFIBP2Q8ND30 876 aa15.53■□□□□ 0.08
HCFC2-201ENST00000229330 RPGRIP1Q96KN7 1286 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms