RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.61
CRX-201ENST00000221996 OSBP2Q969R2 916 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 CLSTN1O94985 981 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
CRX-201ENST00000221996 PDIA6Q15084 440 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 SMARCE1Q969G3 411 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 M0R2C6 588 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 SKILP12757 684 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 PDE6AP16499 860 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 ARGLU1Q9NWB6 273 aaPredicted RBP11.26□□□□□ -0.61
CRX-201ENST00000221996 MAGEC2Q9UBF1 373 aaPredicted RBP11.26□□□□□ -0.61
CRX-201ENST00000221996 USP42Q9H9J4 1324 aaKnown RBP11.26□□□□□ -0.61
CRX-201ENST00000221996 TNS3Q68CZ2 1445 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 MROH5Q6ZUA9 1318 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 SALL3Q9BXA9 1300 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 PDE8BO95263 885 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 AK7Q96M32 723 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
CRX-201ENST00000221996 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 LMTK3Q96Q04 1460 aa11.26□□□□□ -0.61
CRX-201ENST00000221996 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
CRX-201ENST00000221996 TOB2Q14106 344 aaPredicted RBP11.25□□□□□ -0.61
CRX-201ENST00000221996 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 PDCL2Q8N4E4 241 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 KIF18AQ8NI77 898 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 STX8Q9UNK0 236 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 DYNC1I1O14576 645 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 STIM1Q13586 685 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 CCDC24Q8N4L8 307 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 NSUN7Q8NE18 718 aaKnown RBP11.25□□□□□ -0.61
CRX-201ENST00000221996 KAT14Q9H8E8 782 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 CCDC194A0A1B0GVG4 234 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 PRDM1O75626 825 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 CHGBP05060 677 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 TPTE2Q6XPS3 522 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 KIF5BP33176 963 aa11.25□□□□□ -0.61
CRX-201ENST00000221996 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
CRX-201ENST00000221996 TOM1O60784 492 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 AFMP43652 599 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 UBASH3AP57075 661 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 KRT40Q6A162 431 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 BAG3O95817 575 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 HLFQ16534 295 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
CRX-201ENST00000221996 BCAMP50895 628 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
CRX-201ENST00000221996 ZNF771Q7L3S4 317 aaPredicted RBP11.24□□□□□ -0.61
CRX-201ENST00000221996 FTOQ9C0B1 505 aaKnown RBP eCLIP11.24□□□□□ -0.61
CRX-201ENST00000221996 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 LDHCP07864 332 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 RBM5P52756 815 aaKnown RBP eCLIP11.23□□□□□ -0.61
CRX-201ENST00000221996 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 CPLX3Q8WVH0 158 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 IFNKQ9P0W0 207 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 SLIT1O75093 1534 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 UBAP1LF5GYI3 381 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 KIF2AO00139 706 aaPredicted RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 GNPATO15228 680 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 FOXO4P98177 505 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 RTCBQ9Y3I0 505 aaKnown RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 ZNF75DP51815 510 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 DIS3L2Q8IYB7 885 aaKnown RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 VAT1LQ9HCJ6 419 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 KANK3Q6NY19 840 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 TMEM87AQ8NBN3 555 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 PDCL3Q9H2J4 239 aa11.23□□□□□ -0.61
CRX-201ENST00000221996 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
CRX-201ENST00000221996 ELP1O95163 1332 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 LOC102724428A0A0B4J2F2 783 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
CRX-201ENST00000221996 ZNF202O95125 648 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 SIK1P57059 783 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 CEP135Q66GS9 1140 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 IFNL3Q8IZI9 196 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
CRX-201ENST00000221996 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 DHX58Q96C10 678 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 SEC31BQ9NQW1 1179 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 DENND2AQ9ULE3 1009 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
CRX-201ENST00000221996 SPECC1Q5M775 1068 aa11.22□□□□□ -0.61
CRX-201ENST00000221996 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms