RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 GOLGA8BA8MQT2 603 aa25.7■■□□□ 1.7
HTATSF1-201ENST00000218364 ANTXR2P58335 489 aa25.7■■□□□ 1.7
HTATSF1-201ENST00000218364 FKBP4Q02790 459 aaKnown RBP eCLIP25.7■■□□□ 1.7
HTATSF1-201ENST00000218364 ANO1Q5XXA6 986 aa25.7■■□□□ 1.7
HTATSF1-201ENST00000218364 TPM4P67936 248 aa25.69■■□□□ 1.7
HTATSF1-201ENST00000218364 KIF23Q02241 960 aaPredicted RBP25.69■■□□□ 1.7
HTATSF1-201ENST00000218364 KMT5BQ4FZB7 885 aa25.69■■□□□ 1.7
HTATSF1-201ENST00000218364 XIRP1Q702N8 1843 aaKnown RBP25.69■■□□□ 1.7
HTATSF1-201ENST00000218364 NCOA7Q8NI08 942 aa25.69■■□□□ 1.7
HTATSF1-201ENST00000218364 L2HGDHQ9H9P8 463 aa25.69■■□□□ 1.7
HTATSF1-201ENST00000218364 KIF28PB7ZC32 967 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 TUBB4AP04350 444 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 HAND2P61296 217 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 SYNE3Q6ZMZ3 975 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 TIGD1Q96MW7 591 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 FAM53CQ9NYF3 392 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 IKBKBO14920 756 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 SMC2O95347 1197 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 TTC39AQ5SRH9 613 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 TMC6Q7Z403 805 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 APPBP2Q92624 585 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 AKAP2Q9Y2D5 859 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 ABCC12Q96J65 1359 aa25.68■■□□□ 1.7
HTATSF1-201ENST00000218364 WASHC4Q2M389 1173 aa25.67■■□□□ 1.7
HTATSF1-201ENST00000218364 PPP1R13BQ96KQ4 1090 aa25.67■■□□□ 1.7
HTATSF1-201ENST00000218364 PFKFB1P16118 471 aa25.67■■□□□ 1.7
HTATSF1-201ENST00000218364 XAGE2Q96GT9 111 aa25.67■■□□□ 1.7
HTATSF1-201ENST00000218364 UBR2Q8IWV8 1755 aa25.66■■□□□ 1.7
HTATSF1-201ENST00000218364 CPLX1O14810 134 aa25.66■■□□□ 1.7
HTATSF1-201ENST00000218364 SFPQP23246 707 aaKnown RBP eCLIP25.66■■□□□ 1.7
HTATSF1-201ENST00000218364 SLC39A14Q15043 492 aa25.66■■□□□ 1.7
HTATSF1-201ENST00000218364 CPDO75976 1380 aa25.66■■□□□ 1.7
HTATSF1-201ENST00000218364 ZBTB3Q9H5J0 574 aa25.66■■□□□ 1.7
HTATSF1-201ENST00000218364 A1BGP04217 495 aa25.65■■□□□ 1.7
HTATSF1-201ENST00000218364 ADORA1P30542 326 aa25.65■■□□□ 1.7
HTATSF1-201ENST00000218364 TUBE1Q9UJT0 475 aa25.65■■□□□ 1.7
HTATSF1-201ENST00000218364 GJB4Q9NTQ9 266 aa25.65■■□□□ 1.7
HTATSF1-201ENST00000218364 C4AP0C0L4 1744 aa25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 C4BP0C0L5 1744 aa25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 ELF2Q15723 593 aa25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 RALYLQ86SE5 291 aaKnown RBP25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 ISCA1Q9BUE6 129 aa25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 PUS7LQ9H0K6 701 aaKnown RBP25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 KCPQ6ZWJ8 1503 aa25.64■■□□□ 1.7
HTATSF1-201ENST00000218364 BIN1O00499 593 aa25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 WDHD1O75717 1129 aaPredicted RBP25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 CHRNA2Q15822 529 aa25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 CCDC57Q2TAC2 916 aa25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 CCDC93Q567U6 631 aa25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 GORABQ5T7V8 394 aa25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 FBXO38Q6PIJ6 1188 aa25.64■■□□□ 1.69
HTATSF1-201ENST00000218364 ZNF213O14771 459 aa25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 NRDCO43847 1150 aa25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 HPSEQ9Y251 543 aa25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 V9GYY5 206 aaPredicted RBP25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 MROH7-TTC4A0A0A0MT08 1334 aa25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 SCARF1Q14162 830 aa25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 HSD3B7Q9H2F3 369 aa25.63■■□□□ 1.69
HTATSF1-201ENST00000218364 FAM237AA0A1B0GTK4 181 aa25.62■■□□□ 1.69
HTATSF1-201ENST00000218364 FANCCQ00597 558 aa25.62■■□□□ 1.69
HTATSF1-201ENST00000218364 KRT222Q8N1A0 295 aa25.62■■□□□ 1.69
HTATSF1-201ENST00000218364 PPP6R2O75170 966 aa25.62■■□□□ 1.69
HTATSF1-201ENST00000218364 ZAP70P43403 619 aa25.62■■□□□ 1.69
HTATSF1-201ENST00000218364 ERVV-2B6SEH9 535 aa25.61■■□□□ 1.69
HTATSF1-201ENST00000218364 ZMYM6O95789 1325 aa25.61■■□□□ 1.69
HTATSF1-201ENST00000218364 GPAA1O43292 621 aa25.61■■□□□ 1.69
HTATSF1-201ENST00000218364 CABLES1Q8TDN4 633 aa25.61■■□□□ 1.69
HTATSF1-201ENST00000218364 RAB11FIP4Q86YS3 637 aa25.6■■□□□ 1.69
HTATSF1-201ENST00000218364 PAPPAQ13219 1627 aa25.6■■□□□ 1.69
HTATSF1-201ENST00000218364 SYKP43405 635 aa25.6■■□□□ 1.69
HTATSF1-201ENST00000218364 SYT10Q6XYQ8 523 aa25.6■■□□□ 1.69
HTATSF1-201ENST00000218364 CCP110O43303 1012 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 SLFN14P0C7P3 912 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 BCL11BQ9C0K0 894 aaPredicted RBP25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 NBPF3Q9H094 633 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 PCDH11XQ9BZA7 1347 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 PCDH11YQ9BZA8 1340 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 LMOD1P29536 600 aaPredicted RBP25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 PTPAQ15257 358 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 DDX17Q92841 729 aaKnown RBP25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 PLA2G12BQ9BX93 195 aa25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 ANGEL1Q9UNK9 670 aaKnown RBP25.59■■□□□ 1.69
HTATSF1-201ENST00000218364 H2AFXP16104 143 aaPredicted RBP25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 TRIM28Q13263 835 aaKnown RBP25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 TCIRG1Q13488 830 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 JMYQ8N9B5 988 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 ALG1Q9BT22 464 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 TNS3Q68CZ2 1445 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 MARCKSP29966 332 aaPredicted RBP25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 SHC4Q6S5L8 630 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 LTBP4Q8N2S1 1624 aa25.58■■□□□ 1.69
HTATSF1-201ENST00000218364 MYO1BO43795 1136 aa25.57■■□□□ 1.68
HTATSF1-201ENST00000218364 CDKL5O76039 1030 aa25.57■■□□□ 1.68
HTATSF1-201ENST00000218364 CSF1RP07333 972 aa25.57■■□□□ 1.68
HTATSF1-201ENST00000218364 TMX1Q9H3N1 280 aa25.57■■□□□ 1.68
HTATSF1-201ENST00000218364 CBFA2T2O43439 604 aa25.57■■□□□ 1.68
HTATSF1-201ENST00000218364 IGSF3O75054 1194 aa25.57■■□□□ 1.68
HTATSF1-201ENST00000218364 ATP1A3P13637 1013 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms