RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 TADA2BQ86TJ2 420 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 KLHDC4Q8TBB5 520 aa11.51□□□□□ -0.57
CLDN18-201ENST00000183605 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
CLDN18-201ENST00000183605 A0A087WUV0 522 aaPredicted RBP11.5□□□□□ -0.57
CLDN18-201ENST00000183605 NEXNQ0ZGT2 675 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 TAF5LO75529 589 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
CLDN18-201ENST00000183605 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 VSTM4Q8IW00 320 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
CLDN18-201ENST00000183605 CDC23Q9UJX2 597 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 ADGRB1O14514 1584 aa11.5□□□□□ -0.57
CLDN18-201ENST00000183605 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
CLDN18-201ENST00000183605 GOLGA8BA8MQT2 603 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 STX10O60499 249 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 RNF40O75150 1001 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 PPFIA4O75335 1185 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 INPP5BP32019 993 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 TRDNQ13061 729 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 SPECC1LQ69YQ0 1117 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
CLDN18-201ENST00000183605 ENGASEQ8NFI3 743 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 NRXN1Q9ULB1 1477 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 DDX58O95786 925 aaKnown RBP11.49□□□□□ -0.57
CLDN18-201ENST00000183605 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
CLDN18-201ENST00000183605 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 NOC3LQ8WTT2 800 aaKnown RBP11.49□□□□□ -0.57
CLDN18-201ENST00000183605 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 NFE2L3Q9Y4A8 694 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 PFKFB2O60825 505 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 HAND2P61296 217 aa11.49□□□□□ -0.57
CLDN18-201ENST00000183605 RNF187Q5TA31 235 aaPredicted RBP11.49□□□□□ -0.57
CLDN18-201ENST00000183605 DHX37Q8IY37 1157 aaKnown RBP11.49□□□□□ -0.57
CLDN18-201ENST00000183605 A0A1W2PQ27 194 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 A0A1W2PQ64 194 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 A0A1W2PQD8 194 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 AKR1B15C9JRZ8 316 aaPredicted RBP11.48□□□□□ -0.57
CLDN18-201ENST00000183605 IKBKBO14920 756 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CORO7P57737 925 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 NFATC2IPQ8NCF5 419 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 LINC00301Q8NCQ3 95 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 FAM76AQ8TAV0 307 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 EYA1Q99502 592 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CXorf56Q9H5V9 222 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 PLEKHG2Q9H7P9 1386 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CUTAO60888 179 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 IPO7O95373 1038 aaKnown RBP11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CYP21A2P08686 494 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CDR1P51861 262 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 NLRP6P59044 892 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 RTEL1Q9NZ71 1219 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 IFT172Q9UG01 1749 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
CLDN18-201ENST00000183605 CAPZA3Q96KX2 299 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 MED4Q9NPJ6 270 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 DIP2AQ14689 1571 aa11.48□□□□□ -0.57
CLDN18-201ENST00000183605 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 LONRF3Q496Y0 759 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 OTUD6BQ8N6M0 293 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 SETD1AO15047 1707 aaKnown RBP11.47□□□□□ -0.57
CLDN18-201ENST00000183605 STX17P56962 302 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 MTF1Q14872 753 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 SPECC1Q5M775 1068 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 NFXL1Q6ZNB6 911 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 NAPGQ99747 312 aaPredicted RBP11.47□□□□□ -0.57
CLDN18-201ENST00000183605 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 SOWAHDA6NJG2 315 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 PATL2C9JE40 543 aaKnown RBP11.47□□□□□ -0.57
CLDN18-201ENST00000183605 GOLIM4O00461 696 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 YEATS4O95619 227 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 CCDC172P0C7W6 258 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 VSNL1P62760 191 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 STIM1Q13586 685 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 BEND3Q5T5X7 828 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 LRRC31Q6UY01 552 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 CTCFLQ8NI51 663 aaPredicted RBP11.47□□□□□ -0.57
CLDN18-201ENST00000183605 BCAS4Q8TDM0 211 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 HINFPQ9BQA5 517 aa11.47□□□□□ -0.57
CLDN18-201ENST00000183605 AATKQ6ZMQ8 1374 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 GOLGA6CA6NDK9 693 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 GOLGA6DP0CG33 693 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 MCM3P25205 808 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 TUBB4BP68371 445 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 ZNF827Q17R98 1081 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.57
CLDN18-201ENST00000183605 RSRC2Q7L4I2 434 aaKnown RBP11.46□□□□□ -0.57
CLDN18-201ENST00000183605 SLC35F6Q8N357 371 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 IGSF22Q8N9C0 903 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
CLDN18-201ENST00000183605 BPIFA3Q9BQP9 254 aa11.46□□□□□ -0.57
CLDN18-201ENST00000183605 GOLGA6AQ9NYA3 693 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms