RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 HPS5Q9UPZ3 1129 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 HIP1O00291 1037 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 TADA3O75528 432 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 SLC3A2P08195 630 aaKnown RBP6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 ETF1P62495 437 aaKnown RBP6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 AKAP4Q5JQC9 854 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 MEX3CQ5U5Q3 659 aaKnown RBP6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 NAA16Q6N069 864 aaPredicted RBP6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 LMBR1LQ6UX01 489 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 TMEM139Q8IV31 216 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 PDILTQ8N807 584 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 IP6K1Q92551 441 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 ALDH8A1Q9H2A2 487 aaPredicted RBP6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
CEACAM1-201ENST00000161559 CASP1P29466 404 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 C1orf141Q5JVX7 400 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 ADALQ6DHV7 355 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 SHC4Q6S5L8 630 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 KRBA2Q6ZNG9 492 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 UBXN4Q92575 508 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 HAUS7Q99871 368 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 A0A087WZG4 1122 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 KLF18A0A0U1RQI7 1052 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 GOLGA8BA8MQT2 603 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 SPTLC2O15270 562 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 SERPINC1P01008 464 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 CDK11BP21127 795 aaKnown RBP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 ADORA1P30542 326 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 UBASH3AP57075 661 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 ANTXR2P58335 489 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 BMS1Q14692 1282 aaKnown RBP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 CMTR1Q8N1G2 835 aaKnown RBP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 DHX58Q96C10 678 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 DDX21Q9NR30 783 aaKnown RBP eCLIP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 PAG1Q9NWQ8 432 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 UTYO14607 1347 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 TULP2O00295 520 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 FMR1Q06787 632 aaKnown RBP eCLIP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 LONRF3Q496Y0 759 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 MYSM1Q5VVJ2 828 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 KBTBD3Q8NAB2 608 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 C8orf76Q96K31 380 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 MED15Q96RN5 788 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 MRPL44Q9H9J2 332 aaKnown RBP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 RTEL1Q9NZ71 1219 aa6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 PUF60Q9UHX1 559 aaKnown RBP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 FEZ2Q9UHY8 353 aaPredicted RBP6.75□□□□□ -1.33
CEACAM1-201ENST00000161559 CTAGE5O15320 804 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 NEMFO60524 1076 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 PRR29P0C7W0 189 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 CSB-PGBD3P0DP91 1061 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 ZC3H6P61129 1189 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 GNG11P61952 73 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 KRT32Q14532 448 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 TMCO3Q6UWJ1 677 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 ATG9AQ7Z3C6 839 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 CCDC82Q8N4S0 544 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 MNS1Q8NEH6 495 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 DDX17Q92841 729 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 ORAI2Q96SN7 254 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 LZTFL1Q9NQ48 299 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 ZNF335Q9H4Z2 1342 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 AFDNP55196 1824 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 GSDMDP57764 484 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 CC2D1AQ6P1N0 951 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 ZNF790Q6PG37 636 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 LRP10Q7Z4F1 713 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 C10orf67Q8IYJ2 551 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 ANKRD24Q8TF21 1146 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 PARD6BQ9BYG5 372 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 PUS7LQ9H0K6 701 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 BABAM1Q9NWV8 329 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 HEG1Q9ULI3 1381 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 NCAPD2Q15021 1401 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
CEACAM1-201ENST00000161559 CCDC66A2RUB6 948 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 SOWAHDA6NJG2 315 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 PHACTR2O75167 634 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 MYCNP04198 464 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 HOXB7P09629 217 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 NLRP12P59046 1061 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 ZRSR1Q15695 479 aaKnown RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 ANKRD13DQ6ZTN6 518 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 USP49Q70CQ1 688 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 CPLX3Q8WVH0 158 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 ZNF396Q96N95 335 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 NBPF3Q9H094 633 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 NAT10Q9H0A0 1025 aaKnown RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 PPP2R2CQ9Y2T4 447 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 PLEKHG1Q9ULL1 1385 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 LMO7Q8WWI1 1683 aa6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 KIF23Q02241 960 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-201ENST00000161559 SMC1AQ14683 1233 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms