RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 WDR78Q5VTH9 848 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 CCDC110Q8TBZ0 833 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 PUF60Q9UHX1 559 aaKnown RBP14.15□□□□□ -0.14
LMCD1-201ENST00000157600 TTF2Q9UNY4 1162 aaKnown RBP14.15□□□□□ -0.14
LMCD1-201ENST00000157600 HMGB1P1B2RPK0 211 aaPredicted RBP14.15□□□□□ -0.15
LMCD1-201ENST00000157600 EIF4A2Q14240 407 aaKnown RBP14.15□□□□□ -0.15
LMCD1-201ENST00000157600 HAUS3Q68CZ6 603 aa14.15□□□□□ -0.15
LMCD1-201ENST00000157600 DNA2P51530 1060 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 NUCKS1Q9H1E3 243 aaKnown RBP14.14□□□□□ -0.15
LMCD1-201ENST00000157600 A0A1W2PP64 1363 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 FAM13AO94988 1023 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 AFMP43652 599 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 MNAT1P51948 309 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 EYA3Q99504 573 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 VAMP4O75379 141 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 TTLL12Q14166 644 aaPredicted RBP14.14□□□□□ -0.15
LMCD1-201ENST00000157600 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
LMCD1-201ENST00000157600 DEXIO95424 95 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.15
LMCD1-201ENST00000157600 CHMLP26374 656 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 NMIQ13287 307 aaPredicted RBP14.14□□□□□ -0.15
LMCD1-201ENST00000157600 PARP10Q53GL7 1025 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 DENND2AQ9ULE3 1009 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 MAST3O60307 1309 aa14.14□□□□□ -0.15
LMCD1-201ENST00000157600 DKC1O60832 514 aaKnown RBP eCLIP14.13□□□□□ -0.15
LMCD1-201ENST00000157600 AK2P54819 239 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 TSKSQ9UJT2 592 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 CCDC186Q7Z3E2 898 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 CCDC94Q9BW85 323 aaPredicted RBP14.13□□□□□ -0.15
LMCD1-201ENST00000157600 AKR1B15C9JRZ8 316 aaPredicted RBP14.13□□□□□ -0.15
LMCD1-201ENST00000157600 LMBR1LQ6UX01 489 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 CCDC121Q6ZUS5 278 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 SNRKQ9NRH2 765 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 POLKQ9UBT6 870 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 RPGRIP1Q96KN7 1286 aa14.13□□□□□ -0.15
LMCD1-201ENST00000157600 GAS8O95995 478 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 USP26Q9BXU7 913 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 VAT1LQ9HCJ6 419 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 ACTN4O43707 911 aaKnown RBP14.12□□□□□ -0.15
LMCD1-201ENST00000157600 IFT74Q96LB3 600 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 CALCOCO2Q13137 446 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 KIAA0232Q92628 1395 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 MCM6Q14566 821 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 HAUS2Q9NVX0 235 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 TXNDC16Q9P2K2 825 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 NBPF11Q86T75 865 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 DNAJC25Q9H1X3 360 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 SMTNP53814 917 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 BAG1Q99933 345 aaPredicted RBP14.12□□□□□ -0.15
LMCD1-201ENST00000157600 PTPDC1A2A3K4 754 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 EPB41P11171 864 aaKnown RBP14.12□□□□□ -0.15
LMCD1-201ENST00000157600 TTC6Q86TZ1 520 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 HOOK2Q96ED9 719 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 STIM2Q9P246 746 aa14.12□□□□□ -0.15
LMCD1-201ENST00000157600 PPP2R5EQ16537 467 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
LMCD1-201ENST00000157600 SAMD15Q9P1V8 674 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
LMCD1-201ENST00000157600 LDHBP07195 334 aaKnown RBP14.11□□□□□ -0.15
LMCD1-201ENST00000157600 MCTP2Q6DN12 878 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 C19orf44Q9H6X5 657 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 CYP26C1Q6V0L0 522 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 FCHSD1Q86WN1 690 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 ATP6V0A2Q9Y487 856 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 SETDB1Q15047 1291 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 SV2BQ7L1I2 683 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 RAB3IL1Q8TBN0 382 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 ERO1AQ96HE7 468 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
LMCD1-201ENST00000157600 GSTA5Q7RTV2 222 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 FAM76AQ8TAV0 307 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 OGFRQ9NZT2 677 aa14.11□□□□□ -0.15
LMCD1-201ENST00000157600 PUM3Q15397 648 aaKnown RBP14.11□□□□□ -0.15
LMCD1-201ENST00000157600 RPS6KB1P23443 525 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 LMOD1P29536 600 aaPredicted RBP14.1□□□□□ -0.15
LMCD1-201ENST00000157600 CFAP58Q5T655 872 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 MLKLQ8NB16 471 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 TESK2Q96S53 571 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 CAPN2P17655 700 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 CCDC6Q16204 474 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 UBL4BQ8N7F7 174 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 C8orf58Q8NAV2 365 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 PARP1P09874 1014 aaKnown RBP14.1□□□□□ -0.15
LMCD1-201ENST00000157600 TNNI2P48788 182 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 SEL1L2Q5TEA6 688 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 TTC37Q6PGP7 1564 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 MARCKSP29966 332 aaPredicted RBP14.1□□□□□ -0.15
LMCD1-201ENST00000157600 CCDC84Q86UT8 332 aaPredicted RBP14.1□□□□□ -0.15
LMCD1-201ENST00000157600 TMOD4Q9NZQ9 345 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 IP6K1Q92551 441 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 MAP3K9P80192 1104 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 MMRN2Q9H8L6 949 aa14.1□□□□□ -0.15
LMCD1-201ENST00000157600 PZPP20742 1482 aa14.09□□□□□ -0.15
LMCD1-201ENST00000157600 ERCC6LQ2NKX8 1250 aa14.09□□□□□ -0.15
LMCD1-201ENST00000157600 CUTAO60888 179 aa14.09□□□□□ -0.15
LMCD1-201ENST00000157600 CCDC50Q8IVM0 306 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms