RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Tmem59lQ7TNI2 337 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Krt25Q8VCW2 446 aa13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Kri1Q8VDQ9 704 aaKnown RBP13.08□□□□□ -0.32
Lig1-211ENSMUST00000177588 Pald1P70261 859 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Gm28047Q3US59 414 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ehd2Q8BH64 543 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Rdm1Q9CQK3 281 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Filip1Q9CS72 1211 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Cdc45Q9Z1X9 566 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ktn1Q61595 1327 aaKnown RBP13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Pfkfb1P70266 471 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ltv1Q6NSQ7 470 aaKnown RBP13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Nip7Q9CXK8 180 aaKnown RBP13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tubb4aQ9D6F9 444 aa13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 AatfQ9JKX4 526 aaKnown RBP13.07□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ank1Q02357 1862 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Dhx8A2A4P0 1244 aaKnown RBP13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Vgll3P85442 326 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Etf1Q8BWY3 437 aaKnown RBP13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Mylk2Q8VCR8 613 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tiam2Q6ZPF3 1715 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Slc1a4O35874 532 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Trak2Q6P9N8 913 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ankib1Q6ZPS6 1085 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Pnpla2Q8BJ56 486 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Phf20l1Q8CCJ9 1013 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Fam84aQ9D650 292 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Hand2Q61039 217 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Abcf1Q6P542 837 aaKnown RBP13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Emilin2Q8K482 1074 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Pcdhgc5Q91XW9 944 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Large1Q9Z1M7 756 aa13.06□□□□□ -0.32
Lig1-211ENSMUST00000177588 Usp13Q5BKP2 858 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 Asap2Q7SIG6 958 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 GmnnO88513 206 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 Bsdc1Q80Y55 427 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 Sgsm1Q8BPQ7 1093 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 Stard3nlQ9DCI3 235 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 ChmQ9QXG2 665 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 Magi2Q9WVQ1 1275 aa13.05□□□□□ -0.32
Lig1-211ENSMUST00000177588 Carmil3Q3UFQ8 1375 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Slc4a1P04919 929 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 LtkP08923 888 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Myd88P22366 296 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Adam1aQ60813 791 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Mns1Q61884 491 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tmem266Q8BZB3 538 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Mtmr6Q8VE11 617 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Acot9Q9R0X4 439 aaKnown RBP13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Col4a1P02463 1669 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ccdc102aQ3TMW1 549 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Prkag3Q8BGM7 489 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Sec62Q8BU14 398 aaKnown RBP13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Vps18Q8R307 973 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Abcb6Q9DC29 842 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Nek3Q9R0A5 511 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Sema6bO54951 886 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Pde4dQ01063 747 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Cers3Q1A3B0 383 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 MypopQ8R4U1 393 aa13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 Zranb2Q9R020 330 aaKnown RBP13.04□□□□□ -0.32
Lig1-211ENSMUST00000177588 AW822073A0A0N4SUK1 652 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Eya2O08575 532 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Gsdma2Q32M21 443 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Nyap1Q6PFX7 833 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Cep55Q8BT07 462 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tpcn2Q8BWC0 731 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Fam76aQ922G2 307 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Gigyf1Q99MR1 1044 aaKnown RBP13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Chmp3Q9CQ10 224 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Cwc25Q9DBF7 416 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Dctpp1Q9QY93 170 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Prl3d2F6R3P9 224 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Uri1Q3TLD5 531 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Gnl3lQ6PGG6 577 aaKnown RBP13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Klc3Q91W40 508 aa13.03□□□□□ -0.32
Lig1-211ENSMUST00000177588 Vps33bP59016 617 aa13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 Rec8Q8C5S7 591 aa13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 Tgs1Q923W1 853 aa13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 MbipQ99LQ1 341 aa13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 Rbm33Q9CXK9 1231 aaKnown RBP13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 Ltb4r2Q9JJL9 360 aa13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 Sik3Q6P4S6 1311 aa13.02□□□□□ -0.32
Lig1-211ENSMUST00000177588 Gm20425E9Q035 978 aaKnown RBP13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 InhbeO08717 350 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 SrprbP47758 269 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Gtpbp6Q3U6U5 514 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Tada3Q8R0L9 432 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ppil4Q9CXG3 492 aaKnown RBP13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Vnn1Q9Z0K8 512 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 TnksQ6PFX9 1320 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Arl8aQ8VEH3 186 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Zbtb1Q91VL9 713 aa13.02□□□□□ -0.33
Lig1-211ENSMUST00000177588 Lama4P97927 1816 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Capn2O08529 700 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Actn3O88990 900 aaKnown RBP13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Igflr1Q3U4N7 345 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cep63Q3UPP8 700 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Gas2l3Q3UWW6 683 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 PsdQ5DTT2 1024 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms