RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Med23Q80YQ2 1367 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Prkag3Q8BGM7 489 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Ccz1Q8C1Y8 480 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Serpina10Q8R121 448 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Mast2Q60592 1734 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Prr5lA2AVJ5 370 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Metap2O08663 478 aaKnown RBP18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Casp12O08736 419 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Pde6aP27664 859 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Gm43638A0A0J9YU36 694 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Cdkn1cP49919 348 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 XpcP51612 930 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Pla2g4fQ50L41 855 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Nop2Q922K7 793 aaKnown RBP18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Rapgef4Q9EQZ6 1011 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Plekho1Q9JIY0 408 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Cnpy2Q9QXT0 182 aa18.17■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Myh3P13541 1940 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Llgl2Q3TJ91 1027 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Mroh6V9GX81 722 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Gm4340L7N2C4 268 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Irf5P56477 497 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Sec62Q8BU14 398 aaKnown RBP18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Bola3Q8CEI1 110 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 DymQ8CHY3 669 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Ints4Q8CIM8 964 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Gpr108Q91WD0 569 aa18.16■□□□□ 0.5
Sdc1-205ENSMUST00000171158 MsnP26041 577 aaKnown RBP18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Slu7Q8BHJ9 585 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Ddx54Q8K4L0 874 aaKnown RBP18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Naaladl2A0A0N4SUJ3 795 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Me1P06801 572 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Zkscan4Q5SZT6 480 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Acnat2Q8BGG9 420 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Lmod1Q8BVA4 595 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Ginm1Q91WR6 327 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Eaf2Q91ZD6 262 aa18.15■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Snrpa1P57784 255 aaKnown RBP18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Exoc5Q3TPX4 708 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Cdkl5Q3UTQ8 938 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Lrrc8aQ80WG5 810 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Susd4Q8BH32 490 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Slfnl1Q8BHW9 410 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Arid5bQ8BM75 1188 aaKnown RBP18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ces1dQ8VCT4 565 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Krt84Q99M73 603 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Kat6bQ8BRB7 1872 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Lama4P97927 1816 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Scn11aQ9R053 1765 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Speer4dL7N216 212 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Zfp202Q8C879 641 aa18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Luzp1Q8R4U7 1068 aaKnown RBP18.14■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Pfkfb1P70266 471 aa18.13■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Esco1Q69Z69 843 aa18.13■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Kiaa0753Q6A000 959 aa18.13■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ranbp6Q8BIV3 1105 aa18.13■□□□□ 0.49
Sdc1-205ENSMUST00000171158 IcoslgQ9JHJ8 322 aa18.13■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Frmd7A2AD83 703 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Trim30aP15533 496 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Gpatch11Q3UFS4 262 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Lrrc2Q8VDB8 371 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ccdc47Q9D024 483 aaKnown RBP18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Cplx2P84086 134 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Epha2Q03145 977 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ube2oQ6ZPJ3 1288 aa18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Znfx1Q8R151 1909 aaKnown RBP18.12■□□□□ 0.49
Sdc1-205ENSMUST00000171158 NapbP28663 298 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ccdc174Q3U155 467 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Nxf2Q4ZGD8 691 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Myl10Q62082 202 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Sirt2Q8VDQ8 389 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Rcan1Q9JHG6 198 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Acot9Q9R0X4 439 aaKnown RBP18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Cplx1P63040 134 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Washc4Q3UMB9 1173 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Slf2Q6P9P0 1278 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Slc44a1Q6X893 653 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Vps37dQ810I0 261 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 VmacQ8BP01 174 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Dnaaf4Q8R368 420 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Trim34aQ99PP6 485 aa18.11■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Dnm1P39053 867 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Pram1Q6BCL1 675 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ufl1Q8CCJ3 793 aaKnown RBP18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 FliiQ9JJ28 1271 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Stxbp4Q9WV89 557 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Foxp1P58462 705 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ckap2Q3V1H1 664 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Ube3cQ80U95 1083 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Rbm43Q99J64 343 aa18.1■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Myh6Q02566 1938 aaKnown RBP18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Bin1O08539 588 aaKnown RBP18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 U2af2P26369 475 aaKnown RBP18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Pcdhb14Q6PB90 796 aa18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 CtifQ6PEE2 600 aaKnown RBP18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Slitrk3Q810B9 980 aa18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Agtpbp1Q641K1 1218 aa18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 IqcgQ80W32 419 aa18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Tmem87aQ8BXN9 555 aa18.09■□□□□ 0.49
Sdc1-205ENSMUST00000171158 Krt24A1L317 512 aa18.08■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms